Job Description P75906 Confidence 97.82% Date Thu Jan 5 12:15:53 GMT 2012 Rank 72 Aligned Residues 130 % Identity 9% Template c3dhuC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:alpha-amylase; PDBTitle: crystal structure of an alpha-amylase from lactobacillus2 plantarum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.					.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.
Predicted Secondary structure																											.	.	.																										.	.	.	.																					.
Query SS confidence																											.	.	.																										.	.	.	.																					.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	.	.	.	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	.	.	.	.	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	.	L	S
Query Conservation																											.	.	.																										.	.	.	.																					.
Alig confidence																											.	.	.																										.	.	.	.																					.
Template Conservation
Template Sequence		A	G	V	T	A	D	L	Q	R	I	K	D	L	G	T	D	I	L	W	L	L	P	I	N	P	I	G	E	V	N	R	K	G	T	L	G	S	P	Y	A	I	K	D	Y	R	G	I	N	P	E	Y	G	T	L	A	D	F	K	A	L	T	D	R	A	H	E	L	G	M	K	V	M	L	D	I	V	Y	N	H	T
Template Known Secondary structure						T	T								T		S								S		B			T	T			T	T	T			T	T	S	B	S		T	T	S			G	G	G																T	T										S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.						.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	.	.	.	.	.	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																													.	.
Template Conservation																																																									.	.
Template Sequence		S	P	D	S	V	L	A	T	E	H	P	E	W	F	Y	H	D	A	D	G	Q	L	T	N	K	V	G	D	W	S	D	V	K	D	L	D	Y	G	H	H	E	L	W	Q	Y	Q	I	D	T	L	L	Y	W	S	Q	.	.	F	V	D	G	Y	R	C	D
Template Known Secondary structure			T	T	S							G	G	G	B		B		T	T	S		B			S		T	T		T	T				B		T	T		T														T	T	.	.	T		S					T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions