Job Description P75906 Confidence 96.81% Date Thu Jan 5 12:15:53 GMT 2012 Rank 138 Aligned Residues 147 % Identity 12% Template c3bc9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: alpha-amylase b in complex with acarbose Resolution 1.35 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.									.	.	380	.	.	.						.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.							.	.	.	.	.															.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.							.	.	.	.	.															.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	.	.	.	.	.	.	.	.	K	A	D	I	F	S	.	.	.	.	.	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.							.	.	.	.	.															.	.	.
Alig confidence																									.																					.	.	.	.	.	.	.	.							.	.	.	.	.															.	.	.
Template Conservation																									.
Template Sequence		N	L	L	A	E	R	A	P	E	L	A	E	A	G	F	T	A	V	W	L	P	P	A	.	N	K	G	M	A	G	I	H	D	V	G	Y	G	T	Y	D	L	W	D	L	G	E	F	D	Q	K	G	T	V	R	T	K	Y	G	T	K	G	E	L	E	N	A	I	D	A	L	H	N	N	D	I	K	V	Y	F	D
Template Known Secondary structure															T										.	S			T	T	G	G	G			S		S				T	T		S	S		S		B	T	T	B	S	S	B	T	T	B															T	T
Template Predicted Secondary structure																									.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
													398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	L	N	H	R	M	G	A	D	Y	A	E	T	V	L	L	D	E	N	S	R	D	K	P	G	Q	Y	I	K	A	W	T	G	F	N	F	P	G	R	N	G	E	Y	S	N	F	T	W	N	G	Q	C	F	D	G	T	D	W	D	D	Y	S	K	E	S	G	K	Y	L	F	D	E	K	S	W	D	W	T	Y
Template Known Secondary structure					S				S		S							B		T	T		S	S	S	T	T									B			T	T	T	T	T	S	S					B		G	G	G								T	T	T	T							B	T	T							S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
						428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																						.	.						.	.	.	.
Template Conservation																																											.	.						.	.	.	.
Template Sequence		N	W	D	E	D	Y	L	M	G	A	D	V	D	Y	E	N	E	A	V	Q	N	D	V	I	D	W	G	Q	W	I	I	N	N	I	D	F	D	G	F	R	L	.	.	D	A	V	K	H	.	.	.	.	I	D	Y	R	F	I	D	K	W	M	S	A
Template Known Secondary structure		S	T	T		S			S	S					T	T																		T	T								.	.	T	T	G	G	G	.	.	.	.	S
Template Predicted Secondary structure																																											.	.						.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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