Phyre 2 alignment of P75906 with c3b9eA

Job Description P75906
Confidence 97.22% Date Thu Jan 5 12:15:53 GMT 2012

Rank 121 Aligned Residues 193

% Identity 18% Template c3b9eA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase a; PDBTitle: crystal structure of inactive mutant e315m chitinase a from2 vibrio harveyi

Resolution 1.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	.	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D
Query Conservation																							.
Alig confidence																							.						.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																													.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence	V	D	K	K	N	R	D	T	F	V	A	S	V	K	K	F	L	K	T	W	K	F	Y	D	G	V	D	I	.	.	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	P	G	G	G	G	A	A	A	D	K	G	D	P	V	N	D	.	.	.	.	.	.	.	.	G	P	A	Y	I	A
Template Known Secondary structure	T	S																		S	T	T							.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S		S	S	S	T	T				T	T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
	285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.																	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.									.	.	.	.	.	.

	517	.	.	520	.	.	.	.	.	.	.	.	.				530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	F	T	L	E	L	S	A	R	V	K	A	I	R	.	.	.	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I	Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.															.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence	L	M	R	E	L	R	V	M	L	D	E	L	E	A	E	T	G	R	T	Y	E	L	T	S	A	I	G	V	G	Y	.	.	.	.	.	.	D	K	I	E	D	V	D	Y	A	D	A	V	Q	Y	M	D	Y	I	F	A	M	T	Y	D	F	Y	G	G	W	N	N	V	P	G	H	Q	T	A	L	Y	C	G	S	F
Template Known Secondary structure																	S												S		.	.	.	.	.	.				T	T	S						G	G	G		S									S	S		T	T	S	S					S	S		S	S			T	T
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
	339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

																578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.			.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	K	S	A	D	Q	W	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	E	L	Q	A	Q	N	.	.	W	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	M	R	P	G	Q	C	D	G	G	G	V	D	E	N	G	E	P	Y	K	G	P	A	Y	T	A	D	N	G	I	Q	L	L	L	A	Q	G	V	P	A	N	K	L	V	L	G	T	A	M	Y	G	R	G	W	E	G	V	T	P	D	T	L	T	D	P	N	D	P	M	T	G	T	A	T	G	K	L	K	G	S	T
Template Known Secondary structure	S		T	T	T	T	T	T		S	B		T	T	S		B		S	S			S													T			G	G	G							S										G	G	G		S	S	T	T		G	G	G	S			S							G
Template Predicted Secondary structure
Template SS confidence
	413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

																																													615	.	.	.	.	620	.	.	.				.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	G	Q	H	Q	A	I	S	.	.	.	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	G	V	K	N	Y	G	Y	Y	P	D
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence	A	Q	G	V	W	E	D	G	V	I	D	Y	K	G	I	K	S	F	M	L	G	A	N	N	T	G	I	N	G	F	E	Y	G	Y	D	A	Q	A	E	A	P	W	V	W	N	R	S	T	G	E	L	I	T	F	D	D	H	R	S	V	L	A	K	G	N	Y	A	K	S	L	G	L	A	G	L	F	S	W	E	I
Template Known Secondary structure	G	G	T		S	B	T	T											T	T		T	T	S				T	T							T	T	T	T							T	T	T	T																						T		S							G
Template Predicted Secondary structure
Template SS confidence
	493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.

	648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	F	L	H	N	Q	P	E	I	D	L	I	R	P	E	F
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence	D	A	D	.	N	G	D	I	L	N	A	M	H	E	G	M
Template Known Secondary structure	G	G		.		S
Template Predicted Secondary structure				.
Template SS confidence
	573	.	.		.	.	.	.	580	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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