Job Description P75906 Confidence 95.93% Date Thu Jan 5 12:15:53 GMT 2012 Rank 166 Aligned Residues 138 % Identity 17% Template c3aquD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:at4g19810; PDBTitle: crystal structure of a class v chitinase from arabidopsis thaliana Resolution 2.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T
Query Conservation
Alig confidence																																.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	T	S	R	K	S	F	I	D	S	S	I	R	V	A	R	S	Y	G	F	H	G	L	D	L	D	W	E	Y	.	.	.	.	.	.	P	S	S	A	T	E	M	T	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	L	R	E	W	R
Template Known Secondary structure		S																		T	T		S									.	.	.	.	.	.			S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.																											.	.	130	.	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.													.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I	Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E	G	V	A	E	K	S	A	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	W
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		S	A	V	V	A	E	A	S	S	S	G	K	P	R	L	L	L	A	A	A	V	F	Y	S	N	N	Y	Y	S	V	L	Y	.	.	.	.	.	P	V	S	A	V	A	S	S	L	D	W	V	N	L	M	A	Y	D	F	Y	G	P	G	W	S	R	V	T	G	P	P	A	A	L	F	D	P	S	N	A	G	P	S
Template Known Secondary structure										T	T	T	S											S	S	S			T	T				.	.	.	.	.										S												T	T	T		S	B				T	T		S			T	T	S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	E	L	Q	A	Q	N	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	A	G	T	R	S	W	I	Q	A	G	L	P	A	K	K	A	V	L	G	F	P	Y	Y	G	Y
Template Known Secondary structure												T	T			G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions