Job Description P75906 Confidence 97.95% Date Thu Jan 5 12:15:53 GMT 2012 Rank 51 Aligned Residues 134 % Identity 16% Template c3amkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:os06g0726400 protein; PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l Resolution 1.90 Å

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		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		D	E	N	L	Q	Q	M	D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	.	.	.	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																												.								.	.	.	.	.
Template Conservation																																																																					.								.	.	.	.	.
Template Sequence		E	P	E	V	S	T	Y	R	E	F	A	D	N	V	L	P	R	I	R	A	N	N	Y	N	T	V	Q	L	M	A	I	M	E	H	S	Y	Y	A	S	F	G	Y	H	V	T	N	F	F	A	V	S	S	R	S	G	T	P	E	D	L	K	Y	L	V	D	K	A	.	H	S	L	G	L	R	V	.	.	.	.	.
Template Known Secondary structure		S	S	S											T							T	T								S					S		G	G	G	T	T		S		S							G	G	G														.			T	T				.	.	.	.	.
Template Predicted Secondary structure																																																																					.								.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.															.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	D	V	V	H	S	H	A	S	N	N	V	T	D	G	L	N	G	Y	D	V	G	Q	N	T	H	E	S	Y	F	H	T	G	D	R	G	Y	H	K	L	W	D	S	R	L	F	N	Y	A	N	W	E	V	L	R	F	L	L	S	N	L	R	Y	W	M	D	E	F	M	F	D	G	F	R	F	D
Template Known Secondary structure								S						T	T	T	S	G	G	G	G		S	S			G	G	G	S	S	B			G	G	G	G			T	T	T	T				B		T	T	S																					S					T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions