Job Description P75906 Confidence 97.77% Date Thu Jan 5 12:15:53 GMT 2012 Rank 79 Aligned Residues 115 % Identity 9% Template c3a47A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:oligo-1,6-glucosidase; PDBTitle: crystal structure of isomaltase from saccharomyces cerevisiae Resolution 1.59 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.															.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Sequence		K	G	I	A	S	K	L	E	Y	I	K	E	L	G	A	D	A	I	W	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	Y	D	S	P	Q	D	D	M	G	Y	D	I	A	N	Y	E	K	V	W	P	T	Y	G	T	N	E	D	C	F	A	L	I	E	K	T	H	K	L	G	M	K	F	.	.
Template Known Secondary structure							T								T		S						.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	S	S		S							T	T	T																T	T				.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60														.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	T	D	L	V	I	N	H	C	S	S	E	H	E	W	F	K	E	S	R	S	S	K	T	N	P	K	R	D	W	F	F	W	R	P	P	K	G	Y	D	A	E	G	K	P	I	P	P	N	N	W	K	S	Y	F	G	G	S	A	W	T	F	D	E	K	T	Q	E	F	Y	L	R	L	F	C	S	T
Template Known Secondary structure		.	.	.							S	B			T	T	S							T	T		S	S	S	T	T	G	G	G	B						S				T	T	S					S	S		B	B		T	T	S	S	B	S					T	T	T	T						S	S	S	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
				434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		Q	P	D	L	N	W	E	N	E	D	C	R	K	A	I	Y	E	S	A	V	G	Y	W	L	D	H	G	V	D	G	F	R	I	D	V
Template Known Secondary structure				B	B		T	T													T						T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions