Job Description P75906 Confidence 86.26% Date Thu Jan 5 12:15:53 GMT 2012 Rank 204 Aligned Residues 176 % Identity 13% Template c2yl8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: inhibition of the pneumococcal virulence factor strh and2 molecular insights into n-glycan recognition and3 hydrolysis Resolution 1.75 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.					.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.					.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	L	K	E	I	I	D	K	A	K	H	Y	G	Y	T	D	L	H	L	L	V	.	.	G	N	D	G	.	.	.	.	.	.	.	.	.	.	L	R	F	M	L	D	D	M	S	I	T	A	N	G	K	T	Y	A	S	D	D	V	K	R	A	I	E	K	G	T	N	D	Y	Y	N	D	P	N	G	N	H	L
Template Known Secondary structure															T									.	.		S	S	S	.	.	.	.	.	.	.	.	.	.	B					S							T	T																							T	T		S
Template Predicted Secondary structure																								.	.					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.											.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
							384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		T	E	S	Q	M	T	D	L	I	N	Y	A	K	D	K	G	I	G	L	I	P	T	V	N	S	P	G	H	M	D	A	I	L	N	A	M	K	E	L	G	I	Q	N	P	N	F	S	Y	F	G	K	K	S	A	R	T	V	D	L	D	N	E	Q	A	V	A	F	T	K	A	L	I	D	K	Y	A	A	Y	F	A
Template Known Secondary structure																T	T										S	S	S												T									T	T									T	T																				T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		459			460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		F	.	.	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T
Query Conservation			.	.
Alig confidence			.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		K	K	T	E	I	F	N	I	G	L	D	Q	Y	A	N	D	A	T	D	A	K	G	W	S	V	L	Q	A	D	K	Y	Y	P	N	E	G	Y	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	Y	E	K	F	I	A	Y	A	N	D	L	A	R	I	V	K	S	.	H	G	L	K	P	M	A
Template Known Secondary structure		T	T		S								S	T	T					T	S												S	T	T	S	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	T																			.	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.														.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions