Job Description P75906 Confidence 97.67% Date Thu Jan 5 12:15:53 GMT 2012 Rank 99 Aligned Residues 120 % Identity 21% Template c2x4bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:limit dextrinase; PDBTitle: barley limit dextrinase in complex with beta-cyclodextrin Resolution 2.10 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																																									.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	L	V	K	E	V	W	F	.	P	N	R	L	L	P	M	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		L	R	K	L	S	D	A	G	L	T	H	V	H	L	L	P	S	F	H	F	A	G	V	D	D	I	K	S	N	W	K	F	V	D	E	C	E	L	A	T	F	P	P	G	S	D	M	Q	Q	A	A	V	V	A	I	Q	E	E	D	P	Y	N	W	G	Y	N	P	V	L	W	G	V	P	K	G	S	Y	A	S	D
Template Known Secondary structure									T													S	S	S		S		G	G	G										T	T	S		T	T		S										T	T	S	S	S															G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		379	380	.	.	.	.	.	.						.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	I	F	S	R	V	A	.	.	.	.	.	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.												.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		P	D	G	P	S	R	I	I	E	Y	R	Q	M	V	Q	A	L	N	R	I	G	L	R	V	.	.	.	.	.	.	V	M	D	V	V	Y	N	H	L	D	S	S	G	P	C	G	I	S	S	V	L	D	K	I	V	P	G	Y	Y	V	R	R	D	T	N	G	Q	I	E	N	S	A	A	M	N	N	T	A	S	E
Template Known Secondary structure		S	S	S	T																T	T				.	.	.	.	.	.							S	B		S			S	S		S	T	T							S	T	T	T	S	B		B		T	T	S		B			T	T	S	S	S	B	B		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	M	V	D	R	L	I	V	D	D	L	L	N	W	A	V	N	Y	K	V	D	G	F	R	F	D
Template Known Secondary structure		S																		S								T
Template Predicted Secondary structure
Template SS confidence
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions