Job Description P75906 Confidence 61.58% Date Thu Jan 5 12:15:53 GMT 2012 Rank 249 Aligned Residues 134 % Identity 14% Template c2x2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:alpha-1,4-glucan lyase isozyme 1; PDBTitle: crystal structure of the gracilariopsis lemaneiformis alpha-2 1,4-glucan lyase with acarbose Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.						.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		A	N	N	P	S	L	K	E	F	A	Q	Q	I	I	T	V	Q	E	K	S	P	Q	R	I	M	H	I	D	L	D	Y	.	.	.	.	.	V	Y	D	E	N	L	Q	Q	M	D	.	.	.	.	.	.	.	.	.	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D
Query Conservation																																	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																				.	.												.	.	.	.	.											.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																				.	.																																																										.	.	.
Template Sequence		E	N	N	I	S	V	E	E	I	V	E	G	Y	Q	N	N	N	F	.	.	P	F	E	G	L	A	V	D	V	D	M	Q	D	N	L	R	V	F	T	T	K	G	E	F	W	T	A	N	R	V	G	T	G	G	D	P	N	N	R	S	V	F	E	W	A	H	D	K	G	L	V	C	Q	T	N	I	T	.	.	.
Template Known Secondary structure		T	T													T	T	T		.	.									G	G	G	S	B	T	T	B	T	T				G	G	G	B	T	T	S	S				S			T	T	S		B							T	T	T									.	.	.
Template Predicted Secondary structure																				.	.																																																										.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	C	F	L	R	N	D	N	E	G	Q	D	Y	E	V	N	Q	T	L	R	E	R	Q	L	Y	T	K	N	D	S	L	T	G	T	D	F	G	M	T	D	D	G	P	S	D	A	Y	I	G	H	L	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S							T	T												T	T		B					B	T	T								S	S	S		T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I
Query Conservation
Alig confidence		.	.																																.
Template Conservation		.	.																																.
Template Sequence		.	.	G	G	G	V	E	C	D	A	L	F	P	D	W	G	R	P	D	V	A	E	W	W	G	N	N	Y	K	K	L	F	S	.	I	G	L	D	F	V
Template Known Secondary structure		.	.	S	T	T								B		T	T	S	T	T									T					T	.	T	T
Template Predicted Secondary structure		.	.																																.
Template SS confidence
				514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions