Job Description P75906 Confidence 91.96% Date Thu Jan 5 12:15:53 GMT 2012 Rank 188 Aligned Residues 227 % Identity 15% Template c2dskA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase; PDBTitle: crystal structure of catalytic domain of hyperthermophilic chitinase2 from pyrococcus furiosus Resolution 1.50 Å

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		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L
Query Conservation
Alig confidence																	.													.	.	.	.																	.			.								.	.	.	.	.
Template Conservation																	.													.	.	.	.																	.			.								.	.	.	.	.
Template Sequence		L	V	E	Y	A	K	L	T	G	T	K	Y	F	T	L	.	A	F	I	L	Y	S	S	V	Y	N	G	P	.	.	.	.	A	W	A	G	S	I	P	L	E	K	F	V	D	E	V	R	.	E	L	.	R	E	I	G	G	E	V	.	.	.	.	.	I	I	A	F	G	G	A	V	G	P	Y	L	C	Q	Q	A
Template Known Secondary structure										S		S					.							T	T	T	T			.	.	.	.			T	T	T	B		G	G	G	G						.			.		T	T	T				.	.	.	.	.							S	S
Template Predicted Secondary structure																	.													.	.	.	.																	.			.								.	.	.	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.					.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.		.	.		.	.	.	480	.	.	.						.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	E	Q	L	A	E	W	Y	I	K	V	I	D	T	Y	N	A	T	Y	L	D	F	D	I	E	A	G	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																T		S								S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		500																							.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I	Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E	G	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																																																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	K	L	A	D	A	L	L	I	V	Q	R	E	R	.	P	W	V	K	F	S	F	T	L	P	S	D	P	G	I	G	L	A	G	G	Y	G	I	I	E	T	M	A	K	K	G	V	R	V	D	R	V	N	P	M	T	M	D	Y	Y	W	T	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	.	T	T											T	T	T			S	T												T														S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
																		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.					.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		V	A	E	K	S	A	D	Q	W	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	.	.	.	.	E	L	Q	A	Q	N	W	Q	K	N	G	Q	H	Q	A	I	S	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	G	V	K	N	Y	G	Y
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.													.
Template Conservation																																															.
Template Sequence		S	N	A	E	N	A	I	K	V	A	E	N	V	F	R	Q	L	K	Q	I	Y	P	E	K	S	D	E	E	I	W	K	M	I	G	L	T	P	M	I	G	V	N	D	D	K	.	S	V	F	T	L	E	D	A	Q	Q	L	V	D	W	A	I	Q	H	K	I	G	S	L	A	F
Template Known Secondary structure			S																				T	T	S									B			B		B					T	T	S	.																		T	T		S
Template Predicted Secondary structure																																															.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.		.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions