Job Description P75906 Confidence 96.07% Date Thu Jan 5 12:15:53 GMT 2012 Rank 163 Aligned Residues 168 % Identity 11% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

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		334	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.					.	.	.	.	.
Predicted Secondary structure														.														.																																					.	.	.	.						.	.	.	.	.	.	.	.
Query SS confidence														.														.																																					.	.	.	.						.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	.	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	.	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	.	.	.	.	V	N	I	Y	A	.	.	.	.	.	.	.	.
Query Conservation														.														.																																					.	.	.	.						.	.	.	.	.	.	.	.
Alig confidence														.														.																																.					.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																																																												.
Template Sequence		A	G	I	D	Q	K	L	G	Y	I	K	K	T	L	G	A	N	I	L	Y	L	N	P	I	F	K	A	P	T	N	H	K	Y	D	T	Q	D	Y	M	A	V	D	P	A	F	G	D	N	S	T	L	Q	T	L	I	N	D	I	.	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G	V	F	N	H	T	G
Template Known Secondary structure							T						T	T	T								S						S	S	S	S			S		S							T	T	T														.			S	S	S	S	S											S	B
Template Predicted Secondary structure																																																												.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
						400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.											.	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.						.
Predicted Secondary structure		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.							.	.																			.	.	.	.	.
Query SS confidence		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.							.	.																			.	.	.	.	.
Query Sequence		.	.	.	.	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	.	.	.	.	.	.	.	.	.	.	R	L	S	P	F	D	.	.	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	.	.	.	.	.	A
Query Conservation		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.							.	.																			.	.	.	.	.
Alig confidence		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.							.	.																			.	.	.	.	.
Template Conservation
Template Sequence		D	S	H	P	W	F	D	K	Y	N	N	F	S	S	Q	G	A	Y	E	S	Q	S	S	P	W	Y	N	Y	Y	T	F	Y	T	W	P	D	S	Y	A	S	F	L	G	F	N	S	L	P	K	L	N	Y	G	N	S	G	S	A	V	R	G	V	I	Y	N	N	S	N	S	V	A	K	T	Y	L	N	P	P	Y	S
Template Known Secondary structure		T	T	S	T	T	T		T	T			S	S	S			T	T	T		T	T		T	T	G	G	G	B					T	T	T						T	T						B	B				S	T	T								T	T	S	T	T	S							S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		V	D	G	W	R	L	N	A	A	Q	Y	V	D	A	N	G	N	N	G	S	D	V	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	I	W	S	E	F	R	N	A	V	K	G	V	N	.	S	N	A	A	I
Template Known Secondary structure								T	T	G	G	G			S	T	T				S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.																																	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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