Job Description P75906 Confidence 96.60% Date Thu Jan 5 12:15:53 GMT 2012 Rank 150 Aligned Residues 254 % Identity 14% Template c2aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein tm1410; PDBTitle: crystal structure of a putative glycosidase (tm1410) from thermotoga2 maritima at 2.20 a resolution Resolution 2.20 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	.	.
Query Conservation																																																																																.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	E	I	S	S	S	G	F	E	I	A	V	I	D	Y	S	K	D	G	S	E	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	P	E	E	I	K	I	X	V	D	A	G	V	V	P	V	A	Y	V	N	I	G	Q	A	E	D	Y	R	F	Y	W	K	E	S	W	Y	T
Template Known Secondary structure							T	S			S						S	B	S	S	S	S	G	G	G	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T									S	S				T	T	S	T	T			T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
			418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I
Query Conservation		.
Alig confidence		.																																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		N	T	P	E	W	L	G	E	E	D	P	A	W	P	G	N	Y	F	V	K	Y	W	Y	N	E	W	K	E	I	V	F	S	Y	L	.	D	R	V	I	D	Q	G	F	K	G	I	Y	L	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	F	E	Y	W	A	Q	E	G	V	I	S	R	.
Template Known Secondary structure		S			T	T						T	T									T	T	S												.						T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									T	S	S			.
Template Predicted Secondary structure																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.															.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I	Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	S	A	A	R	K	X	I	N	F	V	L	E	I	A	E	Y	V	R	E	.	R	K	P	D	X	L	I	I	P	Q	N	G	E	N	I	L	D	F	.	.	.	.	.	.	.	.	.	D	D	G	Q	L	A	S	T	V	S	G	W	A	V	E	N	L	F	Y	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.			T	T						B	S		G	G	G	G	G	G	.	.	.	.	.	.	.	.	.			S							S						S	S	S			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.																			.	.	.	.	.	.	.	.	.
Template SS confidence
													173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.			.	.	650	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		G	V	A	E	K	S	A	D	Q	W	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	E	L	Q	A	Q	N	W	Q	K	N	G	Q	H	Q	A	I	S	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	G	V	K	N	Y	G	Y	Y	P	D	.	.	N	F	L	H	N	Q	P
Query Conservation																																																																									.	.
Alig confidence				.	.																		.																			.	.	.	.	.	.																										.	.
Template Conservation				.	.																		.																			.	.	.	.	.	.
Template Sequence		T	I	.	.	P	L	E	E	N	E	T	K	S	R	L	E	Y	L	I	R	L	.	N	R	K	G	K	F	I	L	S	V	D	Y	V	D	D	G	S	D	.	.	.	.	.	.	S	F	E	N	I	S	R	I	L	D	Y	Y	E	K	A	K	R	N	G	C	I	P	Y	A	A	R	S	D	L	E	L	D	E	X
Template Known Secondary structure		T		.	.																		.			T	T												S	S		.	.	.	.	.	.																		T	T								T	T					S
Template Predicted Secondary structure				.	.																		.																			.	.	.	.	.	.
Template SS confidence
		232	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		655	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		303	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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