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Job DescriptionP75906
Confidence96.43%DateThu Jan 5 12:15:53 GMT 2012
Rank155Aligned Residues217
% Identity16%Templatec1ur8B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:chitinase b; PDBTitle: interactions of a family 18 chitinase with the designed2 inhibitor hm508, and its degradation product,3 chitobiono-delta-lactone
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   340.........350.........360.........370.........380.........390.........400. ........410.......
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Query Sequence  IQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWM. . PVLSWDLDPTLTRVKY
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Template Sequence  ITPAKAKQLTHINF. SFLDINSNLE. . CAWDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVN
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   36...40......... 50......... 60.........70.........80.........90.........100.........110..
 
   418.420.........430.........440.........450.........460.........470.........480.........490.......
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Query Sequence  LPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIR
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Template Sequence  A. . . . . . . . . . . . . . . . . . VKTPASRAKFAQSCVRIMKDYGFDGVDI. . DW. . . . . EYPQAAEVDGFIAA. . . . . . . . . .
Template Known Secondary structure  ..................TSST
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   113 ......120.........130.........140. .. ......150.......
 
   498.500.........510.........520.........530.........540.........550.........560.........570.. .
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Query Sequence  QNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDWTAIMAM. . . . P
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Template Sequence  . . . . . . . . . . . . . LQEIRTLLNQQTITDGRQALPYQLTI. . . . . AGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGP
Template Known Secondary structure  .............T
TTS

.....SSTTTGGGTT
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   158.160.........170.........180... ......190.........200.........210.........
 
   574.....580.... .....590.........600.........610..
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Query Sequence  YLEGVAEKSAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QWLIQLTNQIKNIPQAKDKSILELQAQN
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Template Sequence  WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYG
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   220.........230.........240.........250.........260.........270.........280.........290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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