Job Description P75906 Confidence 97.71% Date Thu Jan 5 12:15:53 GMT 2012 Rank 93 Aligned Residues 125 % Identity 15% Template c1uokA_ PDB info PDB header:glucosidase Chain: A: PDB Molecule:oligo-1,6-glucosidase; PDBTitle: crystal structure of b. cereus oligo-1,6-glucosidase Resolution 2.00 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.															.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Sequence		R	G	I	I	S	K	L	D	Y	L	K	E	L	G	I	D	V	I	W	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	Y	E	S	P	N	D	D	N	G	Y	D	I	S	D	Y	C	K	I	M	N	E	F	G	T	M	E	D	W	D	E	L	L	H	E	M	H	E	R	N	M	K	L	.	.
Template Known Secondary structure						T	T								T								.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	S	S		S							G	G	G																T	T				.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.														.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.																																											.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	P
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	M	M	D	L	V	V	N	H	T	S	D	E	H	N	W	F	I	E	S	R	K	S	K	D	N	K	Y	R	D	Y	Y	I	W	R	P	G	K	E	G	K	E	P	N	N	W	G	A	A	F	S	G	S	A	W	Q	Y	D	E	M	T	D	E	Y	Y	L	H	L	F	S	K	K	Q	P	D	L	N	W
Template Known Secondary structure		.	.	.							S	B			T	T	S							T	T		T	T		T	T	G	G	G	B						S	S	S	S		S	S		B	B		T	T	S	S	B	S					T	T	T	T						S	S		T	T	S		B	B		T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		D	N	E	K	V	R	Q	D	V	Y	E	M	M	K	F	W	L	.	E	K	G	I	D	G	F	R	M	D	V	I	N	F	I	S	K	E	E	G	L	P
Template Known Secondary structure		T	S																.		T	T							T	T	G	G	G	S				T	T
Template Predicted Secondary structure																			.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions