Job Description P75906 Confidence 63.27% Date Thu Jan 5 12:15:53 GMT 2012 Rank 246 Aligned Residues 195 % Identity 21% Template c1o7dA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lysosomal alpha-mannosidase; PDBTitle: the structure of the bovine lysosomal a-mannosidase2 suggests a novel mechanism for low ph activation Resolution 2.70 Å

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		112	.	.	.													.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	D	D	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	Q	S	F	Y	T	R	V	F	P	I	L	Q	A	F	Q	W	P	A	V	W	A	P	V	G	S	W	V	D	T	P	A	D	K	Q	V	K	F	G	D	E	L	V	D	R	E	Y	F	A	T	W	Q	Q	V	R	E	V	A	R	S	R	L	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	D	Q	Y	F	Y	G	I	Y	N	N	I	Q	P	A	G	V	Q	Y	I	L	D	S	V	I	S	S	L	L	A	N	P	T	R	R	F	I	Y	V	E	I	A	F	F	S	R	W	W	R	Q	Q	T	N	.	.	.	.	.	.	.	.	.	.	.	A	T	Q	K	I	V	R	E	L	V	R	Q	G	R	L
Template Known Secondary structure									T			T	T	T																				T	T																	T	S			.	.	.	.	.	.	.	.	.	.	.												T	T	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.												.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.		.	.	.
Predicted Secondary structure																																																																		.	.											.
Query SS confidence																																																																		.	.											.
Query Sequence		E	L	A	S	H	T	W	N	S	H	Y	G	I	Q	A	N	A	T	G	S	L	L	P	V	Y	V	N	R	A	Y	F	T	D	H	A	R	Y	E	T	A	A	E	Y	R	E	R	I	R	L	D	A	V	K	M	T	E	Y	L	R	T	K	V	E	V	.	.	N	P	H	V	F	V	W	P	Y	G	.	E	A	N
Query Conservation																																																																		.	.											.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.											.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	A	N	G	G	W	V	M	N	D	E	A	T	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	A	I	I	D	Q	M	T	L	G	L	R	F	L	E	E	T	F	G	S	D	G	R	P	R	V	A	W	H	I	D	P	F	G	H	S
Template Known Secondary structure				S	S		S	S	S				S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				G	G	G	G			S					S	S	S	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																												.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																				.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	A	I	E	E	L	K	K	L	G	Y	D	M	F	F	T	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	A	N	A	S	.	Q	L	D	S	I	P	R	V	L	I	A	N	N	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	Q	A	S	L	F	A	Q	M	G	F	D	G	F	F	F	G	R	L	D	Y	Q	D	K	K	V	R	K	K	T	L	Q	M	E	Q	V	W	R	A	S	T	S	L	K	P	P	T	A	D	L	F	T	S	V	L	P	N	M	Y	N	P	P	E	G	L	C	W	D	M	L	C	A	D	K	P	V	V	E	D
Template Known Secondary structure												T							S													T	T		S								S	S	S		T	T	T	T								S	S	T	T	S			T	T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
													298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	K	E	F	A	Q	Q	I	I	T	V	Q	E	K	S	P	Q	R	I	.	.	M	H	I	D	L	D	Y	V	Y	D	E	N	L	Q	Q	M	D	R	N	I	D	V	L	I	Q	R	V	K	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																				.	.											.
Template Conservation																																												.
Template Sequence		T	R	S	P	E	Y	N	A	K	E	L	V	R	Y	F	L	K	L	A	T	D	Q	G	K	L	Y	R	T	K	H	T	V	M	T	M	G	S	D	F	Q	Y	E	.	N	A	N	T	W	F	K	N	L	D	K	L	I	Q	L	V	N	A
Template Known Secondary structure		T	T	S	T	T																			T	T	S	S	S	S									B	T			T	.	T
Template Predicted Secondary structure																																												.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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