Job Description P75906 Confidence 96.36% Date Thu Jan 5 12:15:53 GMT 2012 Rank 158 Aligned Residues 168 % Identity 9% Template c1nouA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-hexosaminidase beta chain; PDBTitle: native human lysosomal beta-hexosaminidase isoform b Resolution 2.40 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.																	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	W	Q	L	R	T	R	S	G	V	N	I
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	I	L	K	T	L	D	A	M	A	F	N	K	F	N	V	L	H	W	H	I	V	.	.	.	.	.	.	.	.	.	.	.	D	D	Q	S	F	P	Y	Q	S	I	T	F	P	E	L	S	N	K	G	S	Y	S	L	S	H	V	Y	T	P	N	D	V	R	M	V	I	E	Y	A	R	L	R	G	I	R	V
Template Known Secondary structure														T	T										.	.	.	.	.	.	.	.	.	.	.		S	S				B			S	S		T							S	S	S	T	T	S		B															T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.												240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	P	E	F	D	T	P	G	H	T	L	S	W	G	K	G	Q	K	D	L	L	T	P	C	Y	S	L	D	S	F	G	P	I	N	P	T	L	N	T	T	Y	S	F	L	T	T	F	F	K	E	I	S	E	V	F	P	D	Q	F	I	H	L	G	G	D	E	V	E	F	K	C	W	E	S	N
Template Known Secondary structure		.	.	.	.	.							S	S	S		T	T					S	T	T										S						T	T																					S	S								S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		P	K	I	Q	D	F	M	R	Q	K	G	F	G	T	D	F	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	F	Y	I	Q	K	V	L	D	I	I	A	T	.	I	N	K	G	S	I	V
Template Known Secondary structure											T	T		T	T		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.																		.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions