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Job DescriptionP75906
Confidence89.86%DateThu Jan 5 12:15:53 GMT 2012
Rank196Aligned Residues162
% Identity12%Templatec1m04A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-n-acetylhexosaminidase; PDBTitle: mutant streptomyces plicatus beta-hexosaminidase (d313n) in complex2 with product (glcnac)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   313......320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  PQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRV. . . . . . .
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Template Sequence  AWRSAMLDVSRHFFG. . . . . VDEVKRYIDRVARYKYNKLHLHLS. . . . . . . . . . . DDQGWRIAIDSWPRLATYGGSTEVG
Template Known Secondary structure  S
SSS


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B
B

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   152.......160...... ...170.........180.........190 .........200.........210.....
 
   386...390.........400.........410.........420.........430.... .....440.........
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Query Sequence  . . . . . . . . . . . . . . AWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPTGEKKAQIHPEQYHR. . LSPFDDRVRAQVGML
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Template Sequence  GGPGGYYTKAEYKEIVRYAASRHLEVVPEIDMPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDV
Template Known Secondary structure  SS



B
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GGGSTTS






S


S




TT
T
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   216...220.........230.........240.........250.........260.........270.........280.........290.....
 
   450.........460.........470.........480.........490.........500.........510.........520.......
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Query Sequence  YEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFTLELSARVKA
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Template Sequence  IGELAALTPGRYLHIGGNEAHSTP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KADFVAFMKRVQPIVAK
Template Known Secondary structure  T

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   296...300.........310......... 320.........330......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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