Job Description P75906 Confidence 97.94% Date Thu Jan 5 12:15:53 GMT 2012 Rank 52 Aligned Residues 129 % Identity 16% Template c1lwhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of t. maritima 4-alpha-glucanotransferase Resolution 2.60 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	.	.	N	R	L	L	P	M	K	A	D	I	F	S	R	V	A	W	Q	L	R	T	R	S	G	V	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.					.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.														.
Template Sequence		R	G	L	K	N	A	V	S	Y	L	K	E	L	G	I	D	F	V	W	L	M	P	V	F	S	S	I	S	F	H	G	Y	D	V	V	D	F	Y	S	F	K	A	E	Y	.	G	S	E	R	E	F	K	E	M	I	E	A	F	.	H	D	S	G	I	K	V	V	L	D	L	P	I	H	H	T	G	F	L	H	T
Template Known Secondary structure							T							T	T		S											S	S	S	S			S		S							G	G	G	.														.			T	T									T	T	B			T	T	S
Template Predicted Secondary structure																																														.														.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																	398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.					.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	W	M	P	V	L	S	W	D	L	D	P	T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	.	.	.	.	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.																												.
Template Conservation																																																																														.
Template Sequence		W	F	Q	K	A	L	K	G	D	P	H	Y	R	D	Y	Y	V	W	A	N	K	E	T	D	L	D	E	R	R	E	W	D	G	E	K	I	W	H	P	L	E	D	G	R	F	Y	R	G	L	F	G	P	F	S	P	D	L	N	Y	D	N	P	Q	V	F	D	E	M	K	R	L	V	L	H	L	L	.	D	M	G
Template Known Secondary structure								T	T						T	T	B		B			T	T			T	T		B		S	S	S			B						T	T	S						T	T		T	T	S		B	B		T	T	S																.			T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.
		459	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	G	I	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	G	F	R	F	D
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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