Job Description P75906 Confidence 99.56% Date Thu Jan 5 12:15:53 GMT 2012 Rank 16 Aligned Residues 288 % Identity 14% Template c1kwgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of thermus thermophilus a4 beta-galactosidase Resolution 1.60 Å

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		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		D	R	N	I	D	V	L	I	Q	R	V	K	D	M	Q	I	S	T	V	Y	L	Q	A	F	A	D	P	D	G	D	G	L	V	K	E	V	W	F	P	N	R	L	L	P	M	K	A	D	I	F	S	R	V	.	.	A	W	Q	L	R	T	R	S	G	V	N	I	Y	A	W	M	P	V	L	S	W	D	L	D	P
Query Conservation																																																							.	.
Alig confidence																									.	.	.	.	.	.	.	.										.	.	.						.					.	.
Template Conservation																									.	.	.	.	.	.	.	.										.	.	.						.
Template Sequence		K	E	R	W	K	E	D	A	R	R	M	R	E	A	G	L	S	H	V	R	I	G	E	.	.	.	.	.	.	.	.	F	A	W	A	L	L	E	P	E	.	.	.	P	G	R	L	E	.	W	G	W	L	D	E	A	I	A	T	L	A	A	E	G	L	K	V	V	L	G	T	P	T	A	T	P	P	K	W	L
Template Known Secondary structure																T								T	.	.	.	.	.	.	.	.	T							S	B	.	.	.	T	T	B			.													T	T	T								S	T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.										.	.	.						.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.				.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.					.	.	460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.												.
Query SS confidence																																																	.	.	.	.												.
Query Sequence		T	L	T	R	V	K	Y	L	P	T	G	E	K	K	A	Q	I	H	P	E	Q	Y	H	R	L	S	P	F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	.	.	.	.	A	F	D	G	I	L	F	H	D	D	A	.	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q
Query Conservation																																																	.	.	.	.												.
Alig confidence																																																	.	.	.	.												.
Template Conservation
Template Sequence		V	D	R	Y	P	E	I	L	P	V	D	R	E	G	R	R	R	R	F	G	G	R	R	H	Y	C	F	S	S	P	V	Y	R	E	E	A	R	R	I	V	T	L	L	A	E	R	Y	G	G	L	E	A	V	A	G	F	Q	T	D	N	E	Y	G	C	H	D	T	V	R	C	Y	C	P	R	C	Q	E	A	F	R
Template Known Secondary structure						G	G	G	S		B		T	T	S		B			S	S	S	S					T	T																				T	T		T	T							S	S	S	T	T	T	T	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		486	.																														.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	S	G	S	L	S	E	I	R	Q	N	P	E	Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	K	A	I	R	G	P	H	I	K	T	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation																																																																											.
Template Sequence		G	W	L	E	A	R	Y	G	T	I	E	A	L	N	E	A	W	G	T	A	F	W	S	Q	R	Y	R	S	F	A	E	V	E	L	P	H	L	T	V	A	E	P	N	P	S	H	L	L	D	Y	Y	R	F	A	S	D	Q	V	R	A	F	N	R	L	Q	V	E	I	L	R	A	H	A	.	P	G	K	F	V	T
Template Known Secondary structure									S	S									T	T	T	G	G	G				S	S	G	G	G				S		S		S	S																																	S	.	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.																.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	I	F	A	L	P	V	I	Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E	G	V	A	E	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	Q	W	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template Sequence		H	N	F	M	G	F	F	T	.	.	.	.	.	.	.	.	.	D	L	D	A	F	A	L	A	Q	D	L	D	F	A	S	W	D	S	Y	P	L	G	F	T	D	L	M	P	L	P	P	E	E	K	L	R	Y	A	R	T	G	H	P	D	V	A	A	F	H	H	D	L	Y	R	G	V	G	.	.	.	.	R	G
Template Known Secondary structure						T	T			.	.	.	.	.	.	.	.	.	S	S						G	G	G	S	S	S														S										T	T	T	T			T	T													T	.	.	.	.	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	S	I	L	E	L	Q	A	Q	N	W	Q	K	N	G	Q	H	Q	A	I	S	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	G	V	K	N	Y	G	Y	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	W	V	M	E	Q	Q	P	G	P	V	N	W	A	P	H	N	P	S	P	A	P	G	M	V	R	L	W	T	W	E	A	L	A	H	G	A	E	V	V	S	Y	F	R
Template Known Secondary structure											S			S	S	S	S	S						T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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