Job Description P75906 Confidence 95.50% Date Thu Jan 5 12:15:53 GMT 2012 Rank 170 Aligned Residues 196 % Identity 17% Template c1kfwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:chitinase b; PDBTitle: structure of catalytic domain of psychrophilic chitinase b from2 arthrobacter tad20 Resolution 1.74 Å

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		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.																	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	D	R	V	R	A	Q	V	G	M	L	Y	E	D	L	A	G	H	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	G	I	L	F	H	D	D	A	L	L	S	D	Y	E	D	A	S	A	P	A	I	T	A	Y	Q	Q	A	G	F	S	G	S	L	S	E	I	R	Q	N	P	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	E	A	S	R	Q	K	L	V	S	S	C	I	D	L	Y	I	K	G	N	L	P	N	F	E	G	R	G	G	A	G	A	A	A	G	I	F	D	G	I	D	I	.	D	W	E	W	P	G	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	L	A	G	N	G	V	D	T	V	N
Template Known Secondary structure		S	S																T	S							T	T				T	T	T	T	T	T	T							.			S		T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T					T	T	T
Template Predicted Secondary structure																																													.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.																	.	.	200	.	.	.	.	.	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		Q	F	K	Q	W	A	R	F	K	S	R	A	L	T	D	F	T	L	E	L	S	A	R	V	.	.	.	.	K	A	I	R	G	P	H	I	K	T	A	R	N	I	F	A	L	P	V	I	Q	P	E	S	E	A	W	F	A	Q	N	Y	A	D	F	L	K	S	Y	D	W	T	A	I	M	A	M	P	Y	L	E	G
Query Conservation																										.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																.	.	.	.												.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	R	A	N	F	K	A	L	L	A	E	F	R	K	Q	L	D	A	Y	G	S	T	N	N	K	K	Y	V	L	S	A	.	.	.	.	.	F	L	P	A	N	P	A	D	I	D	A	G	G	W	D	D	P	A	N	F	K	S	L	D	F	G	S	I	Q	G	Y	D	L	H	G	A
Template Known Secondary structure			.	.	.	.	.	.	.	.																						T	T								.	.	.	.	.				S	S								T	T	T		G	G	G	G	G	T		S							S		S	S		T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
																				578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.			.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	K	S	A	D	Q	W	L	I	Q	L	T	N	Q	I	K	N	I	P	Q	A	K	D	K	S	I	L	E	L	Q	A	Q	N	.	.	W	Q	K	N	G	Q	H	Q	A	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	N	P	T	L	T	G	H	Q	A	N	L	Y	D	D	P	A	D	P	R	A	P	S	K	K	F	S	A	D	K	A	V	K	K	Y	L	A	A	G	I	D	P	K	Q	L	G	L	G	L	A	A	Y	G	R	G	W	T	G	A	K	N	V	S	P	W	G	P	A	T	D	G	A	P	G	T	Y	E	T	A	N
Template Known Secondary structure		T	S	T	T	B				S	S		S	S			T	T			S		G	G	G														T	T			G	G	G							S							S				S	S	S	S		B		S						S	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
																																				624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	Q	L	A	H	W	M	S	L	L	Q	L	N	G	V	K	N	Y	G	Y	Y	P	D	N	F	L	H	N	Q	P	E	I	D	L	I	R	P	E	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	Y	D	K	L	K	T	L	G	T	D	H	Y	D	A	A	T	G	S	A	W	R	Y	D	G	T	Q	W	W	S	Y	D	N	I	A	T	T	K	Q	K	T	D	Y	I	V	S	K	G	L	G	G	G	M	W	W	E	L	S	G	D	R	N	G	E	L	V	G	A	M	S	D	K	F
Template Known Secondary structure								T	T	S	S						T	T	T	T							S	S																					T	T									G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions