Job Description P75906 Confidence 97.97% Date Thu Jan 5 12:15:53 GMT 2012 Rank 50 Aligned Residues 171 % Identity 13% Template c1k1yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase2 complexed with acarbose Resolution 2.40 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		F	D	D	G	Y	Q	S	F	Y	T	R	V	F	P	I	L	Q	A	F	.	Q	W	P	A	V	W	A	P	V	G	S	W	V	D	T	P	A	D	K	Q	V	K	F	G	D	E	L	V	D	R	E	Y	F	A	T	W	Q	Q	V	R	E	V	A	R	S	R	L	V	E	L	A	S	H	T	W	N	S	H	Y	G
Query Conservation																					.
Alig confidence																					.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	E	E	A	Y	N	R	S	Y	R	P	F	M	E	I	L	E	E	F	P	E	M	K	V	N	V	H	F	S	G	P	L	L	E	W	I	E	E	N	K	P	D	Y	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	L	R	S	L	I	K	R	G	Q	L	E	I	V	V	A	G	F	Y	E	P	V	L
Template Known Secondary structure									T										T		T	T																										.	.	.	.	.	.	.	.	.	.	.	.							T	T						B			T	T		B		G
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.													.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	N	A	T	G	S	L	L	P	V	Y	V	N	R	A	Y	F	T	D	H	A	R	Y	E	T	A	A	E	Y	R	E	R	I	R	L	D	A	V	K	M	T	E	Y	L	R	T	K	V	E	V	N	P	H	V	F	V	W	P	Y	G	E	A	N	G	I	A	I	E	E	L	K	K	L	G	Y	D	M	F
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		A	A	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	R	L	V	Q	I	E	M	L	K	D	Y	A	R	.	K	L	G	Y	D	A	K	G	V	W	L	T	E	R	V	W	Q	P	E	L	V	K	S	L	R	E	A	G	I	E	Y	V
Template Known Secondary structure		G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.		T	T									G	G	G				T	T								T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		91	.	.	.																												.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		272	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.																					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	L	E	S	G	L	A	N	A	S	.	Q	L	D	S	I	P	R	V	L	I	A	N	N	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	F	A	Q	Q	I	I	T	V	Q	E	K	S	P	Q	R	I	M	H	I	D	L	D	Y
Query Conservation													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	D	D	Y	H	F	M	S	A	G	L	S	K	E	E	L	F	W	P	Y	Y	T	E	D	G	G	E	V	I	T	V	F	P	I	D	E	K	L	R	Y	L	I	P	F	R	P	V	K	K	T	I	E	Y	L	E	S	L	T	S	D	D	P	S	K	V	A	V	F	H	D	D	G
Template Known Secondary structure												T			G	G	G		S	S							T	T																T	T	T	S															S		T	T									G
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions