Job Description P0AEA2 Confidence 87.48% Date Wed Jan 25 15:20:30 GMT 2012 Rank 3 Aligned Residues 89 % Identity 13% Template c3ly8A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:transcriptional activator cadc; PDBTitle: crystal structure of mutant d471e of the periplasmic domain of cadc Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Q	F	K	P	Y	P	A	S	N	F	S	T	A	V	P	Q	S	A	T	A	M	L	V	T	A	L	K	D	S	R	W	F	I	P	L	E	R	Q	G	L	Q	N	L	L	N	E	R	K	I	I	R	A	A	Q	E	N	G	T	V	A	I	N	N	R	I	P	L	Q	S	L	T	A	A	N	I	M	V	E
Query Conservation
Alig confidence																																				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	K	S	C	N	S	W	S	S	P	Y	Q	L	S	Y	A	I	G	V	G	D	L	V	A	T	S	L	N	T	F	S	T	F	.	M	V	H	D	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	N	I	D	E	P	S	S	S	G	K	T	L	S	I	A	F	V	N	Q
Template Known Secondary structure				S	S	S	S	S	S			T	T																				S	S		.						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																				.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.																			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	I	I	G	Y	E	S	N	V	K	S	G	G	V	G	A	R	Y	F	G	I	G	A	D	T	Q	Y	Q	L	D	Q	I	A	V	N	L	R	V	V	N	V	S	T	G	E	I	L	S	S	V	N	T
Query Conservation
Alig confidence						.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	Y	R	.	.	.	A	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	F	M	S	I	K	L	V	D	N	A	D	G	S	T	M	L	D	K	R	Y
Template Known Secondary structure			S	S	T	.	.	.	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T
Template Predicted Secondary structure						.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		265	.	.	.				.	270	.																							.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions