Job Description P0AFE4 Confidence 41.22% Date Thu Jan 5 11:26:02 GMT 2012 Rank 5 Aligned Residues 91 % Identity 13% Template c3rkoM_ PDB info PDB header:oxidoreductase Chain: M: PDB Molecule:nadh-quinone oxidoreductase subunit m; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		M	I	P	L	Q	H	G	L	I	L	A	A	I	L	F	V	L	G	L	T	G	L	V	I	R	R	N	L	L	F	M	L	I	G	L	E	I	M	I	N	A	S	A	L	A	F	V	V	A	G	S	Y	.	W	G	Q	T	D	G	Q	V	M	Y	I	L	A	I	S	L	A	A	A	E	A	S	I	G	L	A	L
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		I	E	K	Y	Q	G	F	F	H	L	N	L	M	W	I	L	G	G	V	I	G	V	F	L	A	I	D	M	F	L	F	F	F	F	W	E	M	M	L	V	P	M	Y	F	L	I	A	L	W	G	H	K	A	S	D	G	K	T	R	I	T	A	A	T	K	F	F	I	Y	T	Q	A	S	G	L	V	M	L	I	A
Template Known Secondary structure			S	S																						B		B																											S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	L	H	R	R	R	Q	N	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	A	L	V	F	V	H	Y	N	A	T
Template Known Secondary structure											T	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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