Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFE4
Confidence1.03%DateThu Jan 5 11:26:02 GMT 2012
Rank58Aligned Residues9
% Identity11%Templatec2pheC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:alpha trans-inducing protein; PDBTitle: model for vp16 binding to pc4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.....
Predicted Secondary structure 



Query SS confidence 








Query Sequence  RQNLNIDSV
Query Conservation   

 
 
  
Alig confidence 








Template Conservation 




  

Template Sequence  YGALDMADF
Template Known Secondary structure 
TTTT
Template Predicted Secondary structure 




Template SS confidence 








   465....470...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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