Job Description P07102 Confidence 3.22% Date Thu Jan 5 11:00:08 GMT 2012 Rank 86 Aligned Residues 42 % Identity 7% Template c3mu3A_ PDB info PDB header:immune system Chain: A: PDB Molecule:protein md-1; PDBTitle: crystal structure of chicken md-1 complexed with lipid iva Resolution 2.40 Å

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.
Predicted Secondary structure																																																.	.	.										.
Query SS confidence																																																.	.	.										.
Query Sequence		E	L	V	F	E	R	W	R	R	L	S	D	N	S	Q	W	I	Q	V	S	L	V	F	Q	T	L	Q	Q	M	R	D	K	T	P	L	S	L	N	T	P	P	G	E	V	K	L	.	.	.	T	L	A	G	C	E	E	R	N	.	A	Q	G	M	C	S	L
Query Conservation																																																.	.	.										.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.										.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	A	M	V	L	R	Q	S	I	K	E	L	Y	A	K	V	D	L	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K	T	V	L	S	Y	S	E	T	L	C	G	P	G	L	S	K	L	I	F	C	G	K
Template Known Secondary structure								S	S			S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T												S	T	T					T	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions