Job Description P0A8P1 Confidence 8.05% Date Thu Jan 5 11:08:23 GMT 2012 Rank 42 Aligned Residues 64 % Identity 14% Template c3nnqA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3 Resolution 2.69 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.						.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																			.	.	.	.	.	.	.						.	.	.	.	.										.	.	.
Query SS confidence																																			.	.	.	.	.	.	.						.	.	.	.	.										.	.	.
Query Sequence		A	R	L	L	M	A	Y	Q	R	G	I	F	P	W	F	S	P	G	D	P	I	L	W	W	S	P	D	P	R	A	V	L	W	.	.	.	.	.	.	.	P	E	S	L	H	.	.	.	.	.	I	S	R	S	M	K	R	F	H	.	.	.	K	R	S	P	Y	R	V	T	M	N	Y	A	F	G	Q	V	I	E
Query Conservation																																			.	.	.	.	.	.	.						.	.	.	.	.										.	.	.
Alig confidence																					.	.	.												.	.	.	.	.	.	.						.	.	.	.	.										.	.	.
Template Conservation																					.	.	.
Template Sequence		V	T	D	I	K	D	L	T	K	L	G	A	I	Y	D	K	T	K	K	.	.	.	Y	W	V	Y	Q	G	K	P	V	X	P	D	Q	F	T	F	E	L	L	D	F	L	H	Q	L	T	H	L	S	F	S	K	X	K	A	L	L	E	R	S	H	S	P	Y	Y	X	L	N	R	D	R	T	L	K	N	I	T	E
Template Known Secondary structure												T					T	T	T	T	.	.	.					T	T																																					S	S			T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		101	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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