Job Description P0A8P1 Confidence 96.11% Date Thu Jan 5 11:08:23 GMT 2012 Rank 4 Aligned Residues 145 % Identity 14% Template c1p4nA_ PDB info PDB header:ligase Chain: A: PDB Molecule:femx; PDBTitle: crystal structure of weissella viridescens femx:udp-murnac-2 pentapeptide complex Resolution 1.90 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.
Query Sequence		W	W	S	P	D	P	R	A	V	L	W	P	E	S	L	.	.	.	.	.	.	.	.	H	I	S	R	S	M	K	R	F	H	K	R	.	.	.	S	P	Y	R	V	T	M	N	Y	.	.	.	.	.	.	A	F	G	Q	V	I	E	G	C	A	S	D	R	E	E	G	T	W	I	T	R	G	V	V	E	A	Y
Query Conservation																	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.																			.
Template Conservation																																																																									.
Template Sequence		T	I	Q	P	R	L	N	M	V	L	D	L	T	K	F	P	D	A	K	T	T	L	D	L	Y	P	S	K	T	K	S	K	I	K	R	P	F	R	D	G	V	E	V	H	S	G	N	S	A	T	E	L	D	E	F	F	K	T	Y	T	T	M	A	E	R	H	G	I	T	H	R	.	P	I	E	Y	F	Q	R	M
Template Known Secondary structure			S	S		S							G	G	G		T	T			S	G	G	G	G	S														T	T								S																			T					.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																		.	.	.																																								.	.	.	.	.	.
Query SS confidence																																		.	.	.																																								.	.	.	.	.	.
Query Sequence		H	R	L	H	E	L	G	H	A	H	S	I	E	V	W	R	E	D	E	L	V	G	G	M	Y	G	V	A	Q	G	T	L	.	.	.	F	C	G	E	S	M	F	S	R	M	E	N	A	S	K	T	A	L	L	V	F	C	E	E	F	I	G	H	G	G	K	L	I	D	C	Q	V	L	N	.	.	.	.	.	.
Query Conservation																																		.	.	.																																								.	.	.	.	.	.
Alig confidence																																		.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	A	F	D	A	D	T	M	R	I	F	V	A	E	R	E	G	K	L	L	S	T	G	I	A	L	K	Y	G	R	K	I	W	Y	M	Y	A	G	S	M	D	G	N	T	Y	Y	A	P	Y	A	V	Q	S	E	M	I	Q	W	A	L	D	T	N	T	D	L	Y	D	L	G	G	I	E	S	E	S	T	D	D
Template Known Secondary structure					S		T	T	T									T	T												T	T											S	S			T	T																T	T		S								S		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
					192	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	H	T	A	S	L	G	A	C	E	I	P
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		S	L	Y	V	F	K	H	V	F	V	K	D	A	P	R
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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