 |
Job Description | P36938 | Confidence | 21.02% | Date | Thu Jan 5 11:54:03 GMT 2012 |
Rank | 80 | Aligned Residues | 79 |
% Identity | 18% | Template | c2w37A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic; |
PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii
|
Resolution | 2.10 Å |
|
 |
  |   |
65 | . | . | . | . | 70 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | A | I | A | E | E | R | . |
. |
. |
. |
. |
A | K | N | G | I | T | G | P | C | Y | V | G | K | D | T | H | A | L | S | E | P | A | F | I | S | V | L | E | V | L | A | A | N | G | V | D | V | I | V | Q | E | N | N | G | F | T | P | T | P | A | V | S | N | A | I | L | V | H | N | K | K | G | G | P | L | A | D |
Query Conservation |   |
|   |
|   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |   |   | . | . | . |
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
Template Sequence |   |
T | Q | M | L | A | D | F | M | T | V | K | E | N | F | G | K | L | Q | G | L | T | L | T | F | M | G | D | G | R | N | . |
. |
. |
N | V | A | N | S | L | L | V | T | G | A | I | L | G | V | N | I | H | I | V | A | P | K | A | L | F | P | T | E | E | T | Q | N | I | A | K | G | F | A | E | K | S | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T |
|  |  |  |  |  | S |
| T | T | S | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
|
| G | G | G | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
|
|
  |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | V | I | T | P | S | H | N | P | P | E |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
G | A | K | L | V | I | T | D | D | L | D | E |
Template Known Secondary structure |   |
T |
|
|  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|