 |
Job Description | P36938 | Confidence | 38.07% | Date | Thu Jan 5 11:54:03 GMT 2012 |
Rank | 49 | Aligned Residues | 80 |
% Identity | 19% | Template | c2i2xD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:methyltransferase 1; |
PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
|
Resolution | 2.50 Å |
|
 |
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | H | I | L | A | I | A | Q | A | I | A | E | E | R | A | K | N | . |
. |
. |
. |
. |
G | I | T | G | P | C | Y | V | G | K | D | T | H | A | L | S | E | P | A | F | I | S | V | L | E | V | L | A | A | N | G | V | D | V | I | V | Q | E | N | N | G | F | . |
T | P | T | P | A | V | S | N | A | I | L | V | H | N |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   | . |   |
|
|
|   |
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   | . | . | . |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
V | M | M | S | A | D | A | M | L | E | G | I | E | Y | C | K | E | N | S | G | A | T | P | K | T | K | G | T | V | V | C | H | V | A | E | G | D | V | H | D | I | G | K | N | I | V | T | A | L | L | R | A | N | G | Y | N | V | V | . |
. |
. |
D | L | G | R | D | V | P | A | E | E | V | L | A | A | V | Q | K | E | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S |
|
|
|
| S |
|  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  | . | . | . |  |  |  |  |  |  |
| T |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | G | G | P | L | A | D | G | I | V | I | T | P | S |
Query Conservation |   |
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
| . | . | . | . | . | . |   |
|
|
|
|   |   |
Template Sequence |   |
P | I | . |
. |
. |
. |
. |
. |
M | L | T | G | T | A | L |
Template Known Secondary structure |   |
| S | . | . | . | . | . | . |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | |
|
|
|
|
|
. | . | . | 180 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|