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Job DescriptionP36938
Confidence100.00%DateThu Jan 5 11:54:03 GMT 2012
Rank1Aligned Residues545
% Identity96%Templatec2fuvB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:phosphoglucomutase; PDBTitle: phosphoglucomutase from salmonella typhimurium.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPC
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Template Sequence  AIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNGITGPC
Template Known Secondary structure 

STTTTSB

GGG






TT
GGGS


BTTB
GGGTSSSTT

S
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  YVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPN
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Template Sequence  YVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPN
Template Known Secondary structure 
SSTTTT

GGG



T
SS



TT

TT

TT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  GGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGSGI
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Template Sequence  GGPADTNVTKVVEDRANALLAGGLQGVKRISLDAAXASGHVKAVDLVQPFVEGLADIVDXAAIQKAGLTLGVDPLGGSGI
Template Known Secondary structure  SS


TTTTT




TT


GGGTS
T


TT
TT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  EYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNP
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Template Sequence  EYWKRIAEHYKLNLTLVNDQVDQTFRFXHLDKDGAIRXDCSSECAXAGLLALRDKFDLAFANDPDYDRHGIVTPAGLXNP
Template Known Secondary structure  TT

S




TT
TT
B

TTS




TT
TTTTTTGGG
S
TTS
BTT

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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  NHYLAVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFD
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Template Sequence  NHYLAVAINYLFQHRPLWGKDVAVGKTLVSSAXIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFD
Template Known Secondary structure  TTS
TTS
TT
TTS
TT


SSGGGGTTSTTTB
TT
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  GTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQAAATSAQKAALSKLSPEMVSASTLAGDPITAR
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Template Conservation         



    



        
 
 
  
    
                                        
Template Sequence  GTPWSTDKDGIIXCLLAAEITAVTGKNPQEHYNELAARFGAPSYNRLQASATSAQKAALSKLSPEXVSASTLAGDPITAR
Template Known Secondary structure  SSBS
SS

SS





TT

GGG


STT

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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   482.......490.........500.........510.........520.........530.........540......
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Query Sequence  LTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA
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Template Sequence  LTAAPGNGASIGGLKVXTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA
Template Known Secondary structure 
TTT


SS
SSSSSS
T


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   482.......490.........500.........510.........520.........530.........540......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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