 |
Job Description | P36938 | Confidence | 29.79% | Date | Thu Jan 5 11:54:03 GMT 2012 |
Rank | 63 | Aligned Residues | 81 |
% Identity | 12% | Template | c1pyoA_ |
PDB info |
PDB header:hydrolase/hydrolase inhibitor | Chain: A: PDB Molecule:caspase-2; |
PDBTitle: crystal structure of human caspase-2 in complex with acetyl-leu-asp-2 glu-ser-asp-cho
|
Resolution | 1.65 Å |
|
 |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | H | A | L | S | E | P | A | F | I | S | V | L | E | V | L | A | A | N | G | V | D | V | I | V | Q | E | N | N | G | F | T | P | T | P | A | V | S | N | A | I | L | V | H | . |
. |
N | K | K | G | G | P | L | A | D | G | I | V | I | T | P | S | H | N | P | P | E | D | G | G | I | K | Y | N | P | P | N | G | G |
Query Conservation |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |   | . | . |   |
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
| . | . | . |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
| . | . | . |
|   |   |   | . |   |
|   |   |   |
|   |   |
Template Sequence |   |
E | F | R | S | G | G | D | V | D | H | S | T | L | V | T | L | F | K | L | L | G | Y | D | V | H | V | L | C | D | . |
. |
. |
Q | T | A | Q | E | M | Q | E | K | L | Q | N | F | A | Q | L | P | A | H | R | V | T | D | S | C | I | V | A | L | L | S | H | . |
. |
. |
G | V | E | G | . |
A | I | Y | G | V | D | G | K |
Template Known Secondary structure |   |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | G | T | S | S |  |  |  |  |  |  |  | S |
| . | . | . |  |  | T | T | . |  |  |  |
| T | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
| . |
|  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
. | . | . | . | |
. | . | . | 120 | . | . | . | . |
  |
  |   |
164 | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | D | T | N | V | T | K | V | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
L | L | Q | L | Q | E | V | F | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|