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Job DescriptionP36938
Confidence100.00%DateThu Jan 5 11:54:03 GMT 2012
Rank3Aligned Residues502
% Identity22%Templatec1kfiA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:phosphoglucomutase 1; PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80 .........90.........100.........110
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Query Sequence  AGNAEHAVKFGTSGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGP. . CYVGKDTHALSEPAFISVLEVLAANGVDVI
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Template Sequence  VTQPYAGQKPGTSGLRKKVSEA. TQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEV
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TT


BTTB.TSTTS
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   12.......20.........30... ......40.........50.........60.........70.........80.........90
 
   111........120.........130.........140.........150... ......160.........170.........180......
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Query Sequence  VQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDG. . . . GIKYNPPNGGPADTNVTKVVEDRANALLADGLK
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Template Sequence  HVGQAGLMSTPASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTV
Template Known Secondary structure  GGG
B
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TTS

STTT

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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   187..190.........200..... ....210.........220...... ...230.........240........
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Query Sequence  GVKRISLDEAMASGHVKEQ. . . . . . . . . . . . . . DLVQPFVEGLADIVDMAAIQK. . . . AGLTLGVDPLGGSGIEYWKRIG
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Template Sequence  DYEFEKHINLDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHIF
Template Known Secondary structure 


GGGT

TTS
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TT


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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   249250... ......260.........270.........280.........290.........300.........310....... ..320.....
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Query Sequence  . EYYNL. NLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAG. LMNPNHYL
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Template Sequence  GTLLGCSKESLLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSDSLA
Template Known Secondary structure  TTTT


GGGS
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TTGGGS



STTTTTTTT

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GGGS
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BTT
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   251........260.........270.........280.........290.........300.........310.........320.........330
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  AVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPW
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Template Sequence  VIAANANLIFKNGLLG. . . AARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGTGS. . . . . . NH
Template Known Secondary structure  TSTT



...TTS
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STTT......TT
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   331........340...... ...350.........360.........370.........380.........390......... 400.
 
   406...410.........420....... ..430.........440.........450 .........460....... ..470....
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Query Sequence  STDKDGIIMCLLAAEITAVTGK. . . . . . NPQEHYNELAKRFGAPSYNRLQA. AATSAQKAALSKLSPEM. . . . VSASTLA
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Template Sequence  IREKDGIWAVLAWLTILAHKNKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQYFEQLKQGN
Template Known Secondary structure  SSS

TSS
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TTTTSTT
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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
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Query Sequence  GDPITARLTAAPGNGASIGGLKVMTDNG. WFAARPSGTEDA. . . YKIYCESFLGEEHRKQIEKEAVEIVSEVLK
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Template Sequence  KADIYDYVDPVDQSVSKNQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQQIQHETATALANIIKLGLE
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TTT






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   482.......490.........500.........510.........520.........530.........540.........550.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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