 |
Job Description | P36938 | Confidence | 15.91% | Date | Thu Jan 5 11:54:03 GMT 2012 |
Rank | 100 | Aligned Residues | 78 |
% Identity | 17% | Template | c1fvoB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:ornithine transcarbamylase; |
PDBTitle: crystal structure of human ornithine transcarbamylase complexed with2 carbamoyl phosphate
|
Resolution | 2.60 Å |
|
 |
  |   |
65 | . | . | . | . | 70 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | A | I | A | E | E | R | . |
. |
. |
. |
. |
A | K | N | G | I | T | G | P | C | Y | V | G | K | D | T | H | A | L | S | E | P | A | F | I | S | V | L | E | V | L | A | A | N | G | V | D | V | I | V | Q | E | N | N | G | F | T | P | T | P | A | V | S | N | A | I | L | V | H | N | K | K | G | G | P | L | A | D |
Query Conservation |   |
|   |
|   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|
|
|
|   |
|
|   |
|
|   |
|   |   |
|   |
|   |
|
|   |
|   |   |
|
|
| . | . | . |   |   |   | . |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |
Template Sequence |   |
I | Q | I | L | A | D | Y | L | T | L | Q | E | H | Y | S | S | L | K | G | L | T | L | S | W | I | G | D | . |
. |
. |
G | N | N | . |
I | L | H | S | I | M | M | S | A | A | K | F | G | M | H | L | Q | A | A | T | P | K | G | Y | E | P | D | A | S | V | T | K | L | A | E | Q | Y | A | K | E | N | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T |
|  |  |  |  |  | S |
| . | . | . | S |
|  | . |  |  |  |  |  |  | T | T | G | G | G | G | T |
|  |  |  |  |  |
|
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
. | . | . | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
  |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | V | I | T | P | S | H | N | P | P | E |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
G | T | K | L | L | L | T | N | D | P | L | E |
Template Known Secondary structure |   |
T |
|
|  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|