Job Description P76175 Confidence 5.33% Date Thu Jan 5 12:20:07 GMT 2012 Rank 8 Aligned Residues 245 % Identity 14% Template d1v54a_ SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 1.80

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		E	V	L	F	G	T	M	M	L	A	S	L	G	P	V	I	I	S	A	V	V	A	L	L	V	S	N	L	I	N	H	S	D	A	L	L	Y	N	V	Q	L	S	V	.	.	.	T	V	Q	A	R	D	Y	A	L	I	I	S	T	G	V	L	A	G	L	C	G	P	L	L	L	T	L	M	N	A	C	H	R	G
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		K	D	I	G	T	L	Y	L	L	F	G	A	W	A	G	M	V	G	T	A	L	S	L	L	I	R	A	E	L	G	Q	P	G	T	L	L	G	D	D	Q	I	Y	N	V	V	V	T	A	H	A	F	V	M	I	F	F	M	V	M	P	I	M	I	G	G	F	G	N	W	L	V	P	L	M	I	G	A	P	D	M
Template Known Secondary structure																															S	S	S	S		S	S		S																		T	T						T	T											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.															.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	S	L	K	L	A	P	P	W	Q	L	A	L	G	G	L	I	V	G	L	L	S	L	F	T	P	A	V	W	G	N	G	Y	S	T	V	Q	S	F	L	T	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	L	M	I	I	A	G	I	F	L	C	K	L	C	A	V	L	A	S	S	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	P	R	M	N	N	M	S	F	W	L	L	P	P	S	F	L	L	L	L	A	S	S	M	V	E	A	G	A	G	T	G	W	T	V	Y	P	P	L	A	G	N	L	A	H	A	G	A	S	V	D	L	T	I	F	S	L	H	L	A	G	V	S	S	I	L	G	A	I	N	F	I	T	T	I	I	N	M	K
Template Known Secondary structure		S	S										T														S	T	T				S	T	T	T	T		T	T	T	T	S	T	T	T	T		S	S																														S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	P	G	G	V	F	T	P	T	L	F	I	G	L	A	I	G	M	L	Y	G	R	S	L	G	L	W	F	P	D	G	E	E	I	T	L	L	L	G	L	T	G	M	A	T	L	L	A	A	T	T	H	A	P	I	M	S	T	L	M	I	C	E	M	T	G	E	Y	Q	L	L	P	G	L	L	I	A	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	A	M	S	Q	Y	Q	T	P	L	F	V	W	S	V	M	I	T	A	V	L	L	L	L	S	L	P	V	L	A	A	G	I	T	M	L	L	T	D	R	N	L	N	T	T	F	F	D	P	A	G	G	G	D	P	I	L	Y	Q	H	L	F	W	F	F	G	H	P	E	V	Y	I	L	I	L	P	G	F	G
Template Known Secondary structure			T	T			G	G	G	S																																		S				S	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	S	V	I	S	R	T	L	H	R	D	S	I	Y	R	Q	H	T	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	S	H	I	V	T	Y	Y	S	G	K	K	E	P	F	G	Y	M	G	M	V
Template Known Secondary structure											T	T		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions