Job Description P76175 Confidence 3.22% Date Thu Jan 5 12:20:07 GMT 2012 Rank 16 Aligned Residues 125 % Identity 9% Template c3qnqD_ PDB info PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system Resolution 3.29 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	A	A	S	C	F	A	Q	R	F	T	P	R	Q	E	W	K	L	W	I	A	C	G	A	A	A	G	M	A	A	A	Y	R	A	P	L	A	G	S	L	F	I	A	E	V	L	F	G	T	M	M	L	A	S	L	G	P	V	I	I	S	A	V	V	A	L	L	V	S	N	L	I	N	H	S	D	A	L
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		G	A	T	L	A	L	V	V	G	M	L	L	F	A	R	S	Q	Q	L	K	.	.	S	L	G	R	L	S	I	A	P	G	I	F	N	I	N	E	M	V	T	F	G	M	P	I	V	M	N	P	L	L	L	I	P	F	I	V	V	P	V	V	L	T	I	V	S	Y	F	A	M	E	W	G	L	V	A	R	P	S
Template Known Secondary structure		S	S	T													S					.	.						T	S					T	T									T	T		T	T		T	T	T																					T	T	S	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	N	V	Q	L	S	V	T	.	.	.	.	.	.	.	.	.	.	V	Q	A	R	D	Y	A	L	I	I	S	T	G	V	L	A	G	L	C	G	P	L	L	L	T	L	M	N	A	C	H	R	G	F	V	S	L	K
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	A	V	T	W	T	T	P	I	L	F	S	G	Y	L	G	S	G	G	K	I	S	G	V	I	L	Q	L	V	N	F	A	L	A	F	V	I	Y	L	P	F	L	K	I	W	D	K	Q	K	I	A	E	E	K	G	E
Template Known Secondary structure		S					T	T	S									T	T	T	T		T	T	T																															T	T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions