Job Description P76175 Confidence 4.54% Date Thu Jan 5 12:20:07 GMT 2012
Rank 11 Aligned Residues 88
% Identity 14% Template c2ksfA_
PDB info
PDB header: transferaseChain: A: PDB Molecule: sensor protein kdpd;
PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
146 . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
L W I A C G A A A G M A A A Y R A P L A G S L F I A E V L F G T M M L A S L G P V I I S A V V A L L V S N L I N H S D A L L Y N V Q L S V T V Q A R D Y A L I I
Query Conservation  
                                                                                                               
Alig confidence  
. . .
Template Conservation  
                                            .                                       . .            
Template Sequence  
S A V I T L I A M Q W L M A F D A A N L V M L Y L L G V V V V A L F Y .
G R W P S V V A T V I N V V S F D L F F I A P R G T L A V S D V Q .
.
Y L L T F A V M L
Template Known Secondary structure  
S T T S S S S . S S S T T S S S T T S S . .
Template Predicted Secondary structure  
. . .
Template SS confidence  
   
409 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . .
. . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . .
. . . 480 . . . . .
 
   
226 . . . 230 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
S T G V L A G L C G P
Query Conservation  
         
Alig confidence  
Template Conservation  
         
Template Sequence  
T V G L V I G N L T A
Template Known Secondary structure  
Template Predicted Secondary structure  
Template SS confidence  
   
486 . . . 490 . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]