Job Description P52074 Confidence 22.66% Date Thu Jan 5 12:05:10 GMT 2012 Rank 99 Aligned Residues 68 % Identity 12% Template c3rotA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	R	V	L	M	L	E	G	C	A	Q	P	T	L	S	P	N	T	N	A	A	T	A	R	V	L	D	R	L	G	I	S	V	M	P	A	N	E	A	G	C	C	G	A	V	D	Y	H	L	N	A	Q	E	K	G	L	A	R	A	R	N	N	I	D	A	W	W	P	A	I	E	A	G	A	E	A	I	L	Q
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	K	Y	Y	L	I	T	H	G	S	Q	D	P	Y	W	T	S	L	F	Q	G	A	K	K	A	A	E	E	L	K	V	D	L	Q	I	L	A	P	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	D	V	P	K	Q	V	Q	F	I	E	S	A	L	A	T	Y	P	S	G	I	A	T
Template Known Secondary structure										S				S																		T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																T			S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		247	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions