Job Description P52074 Confidence 99.69% Date Thu Jan 5 12:05:10 GMT 2012 Rank 1 Aligned Residues 272 % Identity 10% Template c3kwlA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from helicobacter pylori Resolution 1.94 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	G	V	R	Y	H	N	L	L	D	I	G	R	D	I	V	E	Q	K	V	K	R	P	L	P	E	R	I	L	R	E	G	L	R	Q	V	V	P	R	P	A	V	F	R	A	L	T	Q	V	G	L	V	L	R	P	F	L	P	E	Q	V	R	A	K	L	P	A	E	T	V	K	A	K	P	R	P	P	L	R
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	D	D	N	I	D	H	E	I	Y	E	L	Q	E	I	L	T	N	S	K	I	K	P	W	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	S	K	N	L	L	S	L	F	Q	Y	H	S	N	P	P	K	T	P	N
Template Known Secondary structure		T																		T	S	S		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T					S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																																		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	R	R	V	L	M	L	E	G	C	A	Q	P	T	L	S	P	N	T	N	A	A	T	A	R	V	L	D	R	L	G	I	S	V	M	P	A	N	E	A	G	C	C	G	A	V	D	Y	H	L	N	A	Q	E	K	G	L	A	R	A	R	N	N	I	D	A	W	W	P	A	I	E	A	G	A	E	A	I	L
Query Conservation
Alig confidence																																																				.																	.	.	.								.
Template Conservation																																																				.																	.	.	.								.
Template Sequence		P	P	K	T	C	A	L	F	N	A	Y	A	K	H	L	D	V	Q	S	L	L	K	S	A	K	L	Y	L	E	K	X	G	Q	K	T	I	D	L	P	F	C	Y	D	G	G	Y	Y	G	K	I	.	I	S	T	H	D	F	L	T	A	S	A	Y	N	L	A	L	.	.	.	A	K	A	N	G	V	S	.	L	I
Template Known Secondary structure			T	T										T	T	S																T	T													T	T	T				.																	.	.	.				T	T			.
Template Predicted Secondary structure																																																				.																	.	.	.								.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.		.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		Q	T	A	S	G	C	G	A	F	V	K	E	Y	G	Q	M	L	K	N	D	A	L	Y	A	D	K	A	R	Q	V	S	E	L	A	V	D	.	.	.	.	.	.	.	.	.	.	L	V	E	L	L	R	E	E	P	L	E	K	L	A	I	R	G	D	.	K	K	L	A	F	H	C	P	C	T	L	Q	H	A	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.																			.													.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		F	C	E	E	D	A	Y	L	N	I	L	H	A	K	E	V	L	D	N	N	P	E	I	I	N	S	V	N	E	K	L	K	K	Y	Q	L	V	Y	E	K	D	I	E	I	V	Y	L	N	E	W	V	N	E	F	L	A	W	E	L	K	S	P	F	D	A	F	V	G	A	E	F	S	R	I	K	Q	S	.	.	.
Template Known Secondary structure				S															T	T													G	G	G	T					S																	S				S			T	T		B						S	S				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		K	L	N	G	E	V	E	K	V	L	L	R	L	G	F	T	L	T	D	V	P	D	S	H	L	C	C	G	S	A	G	T	Y	A	L	T	H	P	D	L	A	R	Q	L	R	D	N	K	M	N	A	L	E	S	G	K	P	E	M	I	V	T	A	N	I	G	C	Q	T	H	L	A	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																				.	.								.																																						.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																				.	.								.
Template Sequence		.	.	.	.	.	.	D	H	F	F	N	K	I	H	L	K	A	P	H	F	L	E	S	F	Q	.	.	N	Y	A	P	L	L	E	.	V	N	E	A	S	G	L	L	Q	C	A	H	L	R	Y	L	G	I	D	L	G	A	D	F	L	I	A	H	S	L	G	L	F	Y	A	F	E	N	L	S	L	K	A	S	K
Template Known Secondary structure		.	.	.	.	.	.								T		B					G	G	G	G		.	.			G	G	G	G	G	.	T																			T	T		S					S									T	T	T						T
Template Predicted Secondary structure		.	.	.	.	.	.																				.	.								.
Template SS confidence
								383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
						387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	A	G	R	T	S	V	R	H	W	I	E	I	V	E	Q	A	L	E	K	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		I	Y	K	R	D	N	D	N	T	P	T	L	F	L	P	Q	I	A	L	X	A	X	G	E	K
Template Known Secondary structure		T	S		S																		T	T
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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