Job Description P52074 Confidence 99.07% Date Thu Jan 5 12:05:10 GMT 2012 Rank 9 Aligned Residues 242 % Identity 17% Template c3cf4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	D	S	I	L	R	A	C	V	H	C	G	F	C	T	A	T	C	P	T	Y	Q	L	L	G	D	E	L	D	G	P	R	G	R	I	Y	L	I	K	Q	V	L	E	G	N	E	V	T	L	K	T	Q	E	H	L	D	R	C	L	T	C	R	N	C	E	T	T	C	P	S	G	V	R	Y	H	N	L	L	D
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	V	N	M	V	A	K	C	A	D	C	G	A	C	L	L	A	C	P	E	E	I	D	I	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	M	G	F	A	K	K	G	D	F	S	Y	F	E	E	I	H	D	T	C	I	G	C	R	R	C	E	Q	V	C	K	K	E	I	P	I	L	N	V	I	E
Template Known Secondary structure																					T	T					.	.	.	.	.	.	.	.	.	.	.	.									T	T		T																					T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.													.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		I	G	R	D	I	V	E	Q	K	V	K	R	.	.	.	.	.	.	.	P	L	P	E	R	I	L	R	E	G	L	R	Q	V	V	P	R	P	A	V	F	R	A	L	T	Q	V	G	L	V	L	R	P	F	L	P	E	Q	V	R	A	K	L	P	A	E	T	V	K	A	K	P	R	P	P	L	R	H	K	R	R
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	Q	K	Q	I	A	E	E	K	G	L	M	R	A	G	R	G	Q	V	S	D	A	E	I	R	A	E	G	L	N	L	V	M	.	G	T	T	P	G	I	I	A	I	I	G	C	P	N	Y	A	G	G	T	K	D	V	Y	Y	I	A	E	E	F	L	K	R	N	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T						T											S																.	S	S	S								S					S	S		S	S												T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
		170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		V	L	M	L	E	G	C	A	Q	.	.	.	P	T	L	S	P	N	T	N	A	A	T	A	R	V	L	D	R	L	G	I	S	V	M	P	A	N	E	A	G	C	C	G	A	V	D	Y	H	L	N	A	Q	E	K	G	L	A	R	A	R	N	N	I	D	A	W	W	P	A	I	E	A	G	A	E	A	I	L	Q
Query Conservation											.	.	.
Alig confidence											.	.	.																																																													.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		I	V	V	T	T	G	C	G	A	M	D	I	G	M	F	K	D	A	D	G	K	T	L	Y	E	R	F	P	G	G	F	Q	C	G	G	L	A	N	I	G	S	C	V	S	N	A	H	I	T	G	A	A	E	K	V	A	A	I	F	A	Q	R	T	L	E	G	N	L	A	E	I	G	.	.	.	D	Y	I	L	N
Template Known Secondary structure														T	S				T	T	S							S			S	S	S	T	T							S	G	G	G	G														T	S					T	T							.	.	.
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.				.	.	620	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S	G	C	G	A	F	V	K	E	Y	G	Q	M	L	K	N	D	A	L	Y	A	D	K	A	R	Q	V	S	E	L	A	V	D	L	V	E	L	L	R	E	E	P	L	E	K	L	A	I	R	G	D	K	K
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	G	A	C	G	L	A	W	G	A	F	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	S	S	I	G	T	G	C	N	I	F	G	I	P	A	V	L	G	P	H	S	S	K
Template Known Secondary structure										T	T			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T							G	G	G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.																		.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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