Job Description P52074 Confidence 97.05% Date Thu Jan 5 12:05:10 GMT 2012 Rank 20 Aligned Residues 153 % Identity 15% Template c2vdcI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.									.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.
Predicted Secondary structure																		.	.																.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Query Sequence		T	L	K	T	Q	E	H	L	D	R	C	L	T	C	R	N	.	.	C	E	T	T	C	P	S	G	V	R	Y	H	N	L	L	.	.	.	.	.	.	.	.	D	I	G	R	D	I	V	E	Q	K	V	K	R	P	L	P	E	R	I	L	R	E	G	L	.	.	.	.	.	.	.	.	.	R	Q	V	V	P	R
Query Conservation																		.	.																.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	R	A	N	E	Q	A	N	R	C	S	Q	C	G	V	P	F	C	Q	V	H	C	P	V	S	N	N	I	P	D	W	L	K	L	T	S	E	G	R	L	E	E	A	Y	E	V	S	Q	A	T	N	N	F	P	E	I	C	G	R	I	C	P	Q	D	R	L	C	E	G	N	C	V	I	E	Q	S	T	H	G
Template Known Secondary structure			T	T								S				S	S						T	S	T	T														T														S											G	G	G	S	G	G	G	G		G	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	A	V	F	R	A	L	T	Q	V	G	L	V	L	R	P	F	L	P	E	Q	V	R	A	K	L	P	A	E	T	V	K	A	K	P	R	P	P	L	R	H	K	R	R	V	L	M	L	E	G	C	A	Q	P	T	L	S	P	N	T	N	A	A	T	A	R	V	L	D	R	L	G	I	S	V	M	P	A	N	.
Query Conservation																																																																																	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.																							.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Sequence		A	V	T	I	G	S	V	E	K	Y	.	.	.	.	.	.	.	.	.	.	.	I	N	D	T	A	W	D	Q	G	W	V	K	P	R	T	P	S	R	E	L	G	L	S	V	G	V	I	G	A	.	.	.	.	.	.	.	G	P	A	G	L	A	A	A	E	E	L	R	A	K	G	Y	E	V	H	V	Y	D	R
Template Known Secondary structure		S										.	.	.	.	.	.	.	.	.	.	.									T							S		S	S											.	.	.	.	.	.	.	S														T								S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.												.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	C	C	G	A	V	D	Y	H	L	N	A	Q	E	K	G	L	A	R	A	R	N	N	I	D	A	W	W	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	R	M	G	G	L	L	V	Y	G	I	P	G	F	K	L	E	K	S	V	V	E	R	R	V	K	L	L	A	D
Template Known Secondary structure		S	S	S		S	T					T	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions