Job Description P52074 Confidence 99.56% Date Thu Jan 5 12:05:10 GMT 2012 Rank 2 Aligned Residues 101 % Identity 23% Template c2h89B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.
Query Sequence		T	E	E	M	R	Q	N	A	R	A	L	E	A	D	S	I	L	R	A	C	V	H	C	G	F	C	T	A	T	C	P	T	Y	Q	L	L	G	D	E	L	D	G	P	R	G	R	I	Y	L	I	K	Q	V	L	E	G	N	E	V	T	L	K	T	Q	E	H	.	.	.	.	.	.	.	L	D	R	C	L	T	C
Query Conservation																																																																				.	.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	Q	Y	L	Q	S	I	E	D	R	Q	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S	C	P	S	Y	W	W	N	G	D	K	Y	L	G	P	A	V	L	M	Q	A	Y	R	W	M	I	D	S	R	D	D	Y	T	E	E	R	L	A	Q	L	Q	D	P	F	S	L	Y	R	C	H	T	I
Template Known Secondary structure		S	S											T	T	T	T	T	T	T						T	T	G	G	G								T	T	T															S		T	T		S								T	T		S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	C	E	T	T	C	P	S	G	V	R	Y	H	N	L	L	D	I	G	R	D	I	V	E	Q	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	C	T	R	T	C	P	K	G	L	N	P	G	K	A	I	A	E	I	K	K	M	M	A	T	Y	K
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions