Job Description P52074 Confidence 98.17% Date Thu Jan 5 12:05:10 GMT 2012 Rank 10 Aligned Residues 195 % Identity 17% Template c1gx7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		R	A	C	V	H	C	G	F	C	T	A	T	C	P	T	Y	Q	L	L	G	D	E	L	D	G	P	R	G	R	I	Y	L	I	K	Q	V	L	E	G	N	E	V	T	L	K	T	Q	E	H	L	D	R	C	L	T	C	R	N	C	E	T	T	C	P	S	G	V	.	.	R	Y	H	N	L	L	D	I	G	R	D
Query Conservation																																																																					.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	C	I	G	C	D	T	C	S	Q	Y	C	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	I	F	G	E	M	G	E	P	H	S	I	P	H	I	E	A	C	I	N	C	G	Q	C	L	T	H	C	P	E	N	A	I	Y	E	A	Q	S	W	V	P	E	V	E	K
Template Known Secondary structure		T	S			S			S	G	G	G	G		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			B			T	T	S			B				T	T	T	S		S			S	S	S	T	T	S	T	T						S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.																				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	E	Q	K	V	K	R	P	L	P	E	R	I	L	R	E	G	L	R	Q	V	V	P	R	P	A	V	F	R	A	L	T	Q	V	G	L	V	L	R	P	F	L	P	E	Q	V	R	A	K	L	P	A	E	T	V	K	A	K	P	R	P	P	L	R	H	K	R	R	V	L	M	L	E	G	C	A	Q	P	T
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	K	D	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	C	I	A	M	P	A	P	A	V	R	Y	A
Template Known Secondary structure					T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.																																																													100	.	.	.	.	.	.	.	.	.	110	.	.	.
		181	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		L	S	P	N	T	N	.	.	.	.	.	.	.	.	A	A	T	A	R	V	L	D	R	L	G	I	S	V	M	P	A	N	E	A	G	C	C	G	A	V	D	Y	H	L	N	A	Q	E	K	G	L	A	R	A	R	N	N	I	D	A	W	W	P	A	I	E	A	G	A	E	A	I	L	Q	T	A	S	G	C	G
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	D	A	F	G	M	P	V	G	S	V	T	T	G	K	M	L	A	A	L	Q	K	L	G	F	A	H	C	W	D	T	E	F	.	.	.	.	.	.	.	.	.	.	T	A	D	V	T	I	W	E	E	G	S	E	F	V	E	R	L	T	K	K	S	D	M	P	L	P	Q	F	T	S	C	C	P	G	W	Q
Template Known Secondary structure			G	G	G	G	T			S	S	S		T											T	T				B						.	.	.	.	.	.	.	.	.	.																		T	T	S	S				S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.											.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		253	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	F	V	K	E	.	Y	G	Q	M	L	K	N	D	A	L	Y	A	D	K	A	R	Q	V	S	E	L	A	V	D	L	V	E	L	L	R	E	E	P	L	E	K	L	A	I	R	G	D	K	K	L	A	F	H	C	P	C	T	L	Q	H
Query Conservation							.
Alig confidence							.																																				.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		K	Y	A	E	T	Y	Y	P	E	L	L	P	H	F	S	T	C	K	S	P	I	G	M	N	G	A	L	A	K	T	Y	G	A	E	R	M	K	Y	D	P	K	.	.	.	.	.	.	Q	V	Y	T	V	S	I	M	P	C	I	A	K	K
Template Known Secondary structure									G	G	G	G	G	G	S		S													T	T						T	T			G	G	.	.	.	.	.	.	G								S		T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.							.	.	.	.	.	230	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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