Job Description P23872 Confidence 99.91% Date Thu Jan 5 11:40:10 GMT 2012 Rank 40 Aligned Residues 233 % Identity 16% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		59	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.												.	.	.	.																																																	.	.	.	.
Query SS confidence														.												.	.	.	.																																																	.	.	.	.
Query Sequence		A	T	R	A	Y	M	V	P	T	K	Y	G	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	.	.	.	.
Query Conservation														.												.	.	.	.																																																	.	.	.	.
Alig confidence														.												.	.	.	.																										.							.																.	.	.	.
Template Conservation																																																							.							.
Template Sequence		V	S	E	Q	R	F	Y	Q	S	K	D	G	T	R	V	P	L	I	I	S	Y	R	K	G	L	K	L	D	G	S	N	P	T	I	L	Y	G	Y	G	G	F	D	V	S	L	T	P	S	F	S	V	S	V	.	A	N	W	L	D	L	.	G	G	V	Y	A	V	A	N	L	R	G	G	G	E	Y	G	Q	A	W
Template Known Secondary structure											T	T	S											T	T				S	S											B	T	T	B											.						T	.	T									T	T	S	S	S	S
Template Predicted Secondary structure																																																							.							.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	F	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																																	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		H	L	A	G	T	Q	Q	N	K	Q	N	V	F	D	D	F	I	A	A	A	E	Y	L	K	A	E	G	Y	T	R	T	D	R	L	A	I	R	G	G	S	N	G	G	L	L	V	G	A	V	X	T	Q	.	.	.	.	.	.	R	P	D	L	X	R	V	A	L	P	A	V	G	V	L	D	X	L	R	Y	H	T
Template Known Secondary structure				T	T	S	G	G	G																		T	T	S			G	G	G							T													.	.	.	.	.	.		T	T	T		S						S					G	G	G	S	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550							.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																	.	.															.	.															.
Query SS confidence																																																	.	.															.	.															.
Query Sequence		R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	.	.	P	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	.
Query Conservation																																																	.	.															.	.															.
Alig confidence									.	.	.	.	.	.	.	.	.																																.	.															.	.															.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		F	T	A	G	T	G	W	.	.	.	.	.	.	.	.	.	A	Y	D	Y	G	T	S	A	D	S	E	A	X	F	D	Y	L	K	G	Y	S	P	L	H	N	V	R	P	G	V	S	Y	P	S	T	X	V	T	T	A	D	H	D	D	R	V	V	P	A	H	S	F	K	F	A	A	T	L	Q	A	D	N	A	G
Template Known Secondary structure		S	G	G	G	G	G		.	.	.	.	.	.	.	.	.							S	S	S													T	T	T	T			T	T												S	S		S	S	S		T												T	T			S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		573	.	.	.	.	.	.										580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
				281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation		.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	P	Q	L	I	R	I	E	T	P	V	A	K	L	.	.	.	.	.	.	.	.	.	.	.	I	E	Q	S	A	D	I	Y	A	F	T	L	Y	E	X
Template Known Secondary structure		S	S														.	.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.												.	660	.	.	.	.	.	.	.	.	.	670	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions