40 c3iumA_ Probab=99.91   E-value=4.3e-22  Score=141.38  Aligned_columns=233  Identities=16%

Q ss_pred             CEEEEEEECCCC-CEEEEEEECCC----CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC----
Q ss_conf             348999857998-38999983179----997189997287455787110489999999866969999668757654----
Q batch____        59 ATRAYMVPTKYG-QVETRLFCPQP----DSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYTLSPEA----  129 (319)
Q Consensus        59 ~~~~~~~~~~~~-~v~~~l~~P~~----~~~p~vi~~HGGg~~~g~~~~~~~~~~~~a~~~G~~V~~vdYr~~p~~----  129 (319)
                      ..+.+.+++.|| +|+++|+.|.+    ++.|+||++|||............. +.|+++ ||+|+.+|||++.+.    
T Consensus       407 ~~~~~~~~s~DG~~ip~~l~~p~~~~~~~~~P~il~~yGGp~~~~~~~f~~~~-~~l~~~-G~~v~~~n~RGs~g~G~~w  484 (668)
T c3iumA_         407 VSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSV-ANWLDL-GGVYAVANLRGGGEYGQAW  484 (668)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCBTTBCCCCCCCHHH-HHHHHT-TCEEEEECCTTSSSSCHHH
T ss_pred             EEEEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH-HHHHHC-CCEEEEECCCCCCCCCHHH
T ss_conf             14589997699459869999458888657621899944888764676679989-899988-9489997577898669889


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH
Q ss_conf             ----4664289999999876410332112223321244321012368899864431776557546787355546677621
Q batch____       130 ----RFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVT  205 (319)
Q Consensus       130 ----~~~~~~~d~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (319)
                          .......+..+.+..+.........++.++.+.|+|.||.+++.....      .+..+++.+...|+++......
T Consensus       485 ~~~~~~~~~~~~~~D~i~~~~~L~~~g~~d~~ri~i~G~S~GG~l~~~~~~~------~Pdlf~a~v~~~~~~d~~~~~~  558 (668)
T c3iumA_         485 HLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVXTQ------RPDLXRVALPAVGVLDXLRYHT  558 (668)
T ss_dssp             HHTTSGGGHHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHH------CTTTCSEEEEESCCCCGGGSTT
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHHHHHC------CCCCCCEEEEECCCCCCCCCCC
T ss_conf             9877757086643269999999998889884138998568479999999744------8753304885278543222467


Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCC--EEEEEECCCCCCHH--HHHHHHHHHHHCCC-
Q ss_conf             32103455457857899998622554443331110833221225797--39999779852067--99999999997699-
Q batch____       206 RRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTREVP--PCFIAGAEFDPLLD--DSRLLYQTLAAHQQ-  280 (319)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--p~li~~G~~D~~~~--~~~~~~~~l~~~g~-  280 (319)
                      .......         ...+................+|+.++.+...  |+||+||.+|..|+  |+..|+++||++++ 
T Consensus       559 ~~~~~~~---------~~e~g~~~~~~~~~~~~~~~SP~~~v~~~~~ypp~li~~g~~D~rV~~~~~~k~~~~Lr~~~~~  629 (668)
T c3iumA_         559 FTAGTGW---------AYDYGTSADSEAXFDYLKGYSPLHNVRPGVSYPSTXVTTADHDDRVVPAHSFKFAATLQADNAG  629 (668)
T ss_dssp             SGGGGGC---------HHHHCCSSSCHHHHHHHHHHCTTTTCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHTTCCS
T ss_pred             CCCCHHH---------HHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             8765667---------8871888881789999987093876763167786675513779878857889999999985899


Q ss_pred             --CEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             --689999878852000267889889999999999998519
Q batch____       281 --PCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL  319 (319)
Q Consensus       281 --~~~l~~~~g~~H~f~~~~~~~~~a~~~~~~~~~fl~~~L  319 (319)
                        ++-|.+..+.+|+           -+-..++.+|+-.||
T Consensus       630 ~~~vll~~~~~~gh~-----------~~~~a~~~aF~~~~~  659 (668)
T c3iumA_         630 PHPQLIRIETPVAKL-----------IEQSADIYAFTLYEX  659 (668)
T ss_dssp             SSCEEEEEECCHHHH-----------HHHHHHHHHHHHHHT
T ss_pred             CCEEEEEEECCCCCH-----------HHHHHHHHHHHHHHC
T ss_conf             832899973888726-----------899999999998828