Job Description P0C8J6 Confidence 83.16% Date Thu Jan 5 11:30:05 GMT 2012 Rank 268 Aligned Residues 160 % Identity 16% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.												.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																			.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	.	.	.	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	.	.	.	.	.	.	.	.	.	.	.	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A
Query Conservation																			.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	V	V	Q	K	A	L	K	G	G	A	T	L	Y	Q	F	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A	A	C	R	E	A	G	V	P	F	I	V	N	D	D	V	E	L	A	L	N	L	K	A	D	G	I	H	I	G	Q	E	D	A	N	A	K	E	V	R	A	A
Template Known Secondary structure												T		S								S	T	T																						T							S									T		S						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		153	.									.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																					.																											.
Query SS confidence				.	.	.	.	.	.	.	.																					.																											.
Query Sequence		L	Y	.	.	.	.	.	.	.	.	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	.	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	.	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I
Query Conservation				.	.	.	.	.	.	.	.																					.																											.
Alig confidence				.	.	.	.	.	.	.	.												.									.																											.												.	.
Template Conservation																							.																																																.	.
Template Sequence		I	G	D	M	I	L	G	V	S	A	H	T	M	S	E	V	K	Q	A	E	E	.	D	G	A	D	Y	V	G	L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G	I	G	G	I	.	.	T	I	D	N	A	A	P	V	I
Template Known Secondary structure			T	T	S								S										.		T		S							S	S				S	S	S	S						T	T									T	T									S	S		.	.		T	T	T	S
Template Predicted Secondary structure																							.																																																.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		K	L	G	I	C	K	I	N	V	A	T	E	L	K	.	.	.	.	.	N	A	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		Q	A	G	A	D	G	V	S	M	I	S	A	I	S	Q	A	E	D	P	E	S	A	A	R	K	F	R	E	E	I	Q	T
Template Known Secondary structure			T	T		S					S					T	S	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions