|   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
. | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | T | A | A | N | L | H | A | P | V | I | I | A | G | T | P | G | T | F | T | H | A | G | T | E | N | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | L | V | S | A | M | A | K | Q | Y | H | . |
H | P | L | A | I | H | L | D | H | H | T | K | F | . |
. |
. |
. |
D | D | I | A | Q | K | V | R | S | G |
Query Conservation |   |
  |
|
|
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|   | . |
|
|
|   |
|
|
|
|
|   |   |   |   | . | . | . | . |
|   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|
|   |
|   |   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |
|
|   |
|   |
|   |   |   |
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |
|
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |
|
Template Sequence |   |
K | S | E | E | A | G | D | I | D | L | I | V | I | Y | N | S | G | R | Y | R | X | A | G | R | G | S | L | A | G | L | L | A | Y | G | N | A | N | Q | I | V | V | D | X | A | R | E | V | L | P | V | V | R | H | T | P | V | L | A | G | V | N | G | T | D | P | F | X | V | X | S | T | F | L | R | E | L | K | E | I | G |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
| S |  |  |  |  |
|  |  |  |  |  |  |  | T | T |
|
| G | G | G | G | G | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S | S |
|  |  |  |  |  |
| T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
  |   |
98 | . | 100 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | S | V | M | . |
. |
. |
. |
. |
. |
. |
I | D | A | S | H | L | P | F | A | Q | N | I | S | R | V | . |
. |
. |
. |
. |
. |
. |
K | E | V | V | D | F | C | H | R | F | D | V | S | V | E | A | E | L | G | Q | L | G | G | Q | E | D | D | V | Q | V | N | E | A | D | A | L | Y | T | N | P | A | Q | A | R | E | F |
Query Conservation |   |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|   |
|
|   |
|
|
|
|   |   |
| . | . | . | . | . | . | . |   |
|
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|
| . | . | . |   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|
| . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|
|   |   |
|
Template Sequence |   |
F | A | G | V | Q | N | F | P | T | V | G | L | I | D | G | . |
. |
. |
L | F | R | Q | N | L | E | E | T | G | X | S | Y | A | Q | E | V | E | X | I | A | E | A | H | K | L | D | L | L | . |
. |
. |
. |
. |
. |
T | T | P | Y | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | S | P | E | D | A | V | A | X |
Template Known Secondary structure |   |
|
|  |  |  |  |
| S |
| G | G | G |
|
|  | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . | . | . | . | . | . |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  |  |
|  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
170 | . | . | . | . | . | . | . | . |
  |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | A | T | G | I | D | S | L | A | V | A | I | G | T | A |
Query Conservation |   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . |
|
|
|
|
|
|
|
|   |
|   |
|   |
|
Template Sequence |   |
A | . |
K | A | G | A | D | I | L | V | C | H | X | G | L | T |
Template Known Secondary structure |   |
 | . |  |  | T |
| S |
|
|  |  |
|
| S |
|
|
Template Predicted Secondary structure |   |
 | . |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |