Job Description P0C8J6 Confidence 40.55% Date Thu Jan 5 11:30:05 GMT 2012 Rank 455 Aligned Residues 149 % Identity 18% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	Q	R	G	G	Y	A	V	P	A	F	N	I	H	N	L	.	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I	H	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																	.																		.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																		.	.	.	.	.	.	.
Template Sequence		E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	.	A	L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	.	.	.	.	.	.	.	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M
Template Known Secondary structure						S	S												G	G	G												T			.																		.	.	.	.	.	.	.					S	S							T	T	T						S
Template Predicted Secondary structure																																				.																		.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.								.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	.	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q
Query Conservation																	.
Alig confidence																	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	A	L	T
Template Known Secondary structure		T	T	S	S														T		S							S	S	T	T	S	S	S														S			T	T											S	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.														360	.	.	.	.
		160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	R	E	F	A	E	A	T	G	.	I	D	S	L	A	V	A	I	G	T	A	H	G
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G
Template Known Secondary structure											S	S		S				B	S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions