Job Description P0C8J6 Confidence 97.28% Date Thu Jan 5 11:30:05 GMT 2012 Rank 56 Aligned Residues 179 % Identity 13% Template d1xm3a_ SCOP info TIM beta/alpha-barrel ThiG-like ThiG-like Resolution 1.80

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	H	H	P	L	A	I	H	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	.	.	.	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence										.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation										.	.	.	.
Template Sequence		S	F	Q	S	R	L	L	L	.	.	.	.	G	T	G	K	Y	P	S	F	D	I	Q	K	E	A	V	A	V	S	E	S	D	I	L	T	F	A	V	R	R	X	N	I	F	L	E	Q	L	D	L	S	K	Y	T	L	L	P	N	T	A	G	A	S	T	A	E	E	A	V	R	I	A	R	L	A	K	A	S	G
Template Known Secondary structure				S						.	.	.	.			S		S	S													T		S						T	T	S	S	T	T			T	T			G	G	G	S							T	T		S	S														T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		R	S	V	M	I	D	A	S	H	L	P	F	A	Q	.	.	.	.	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		L	C	D	X	I	K	V	E	V	I	G	C	S	R	S	L	L	P	D	P	V	E	T	L	K	A	S	E	Q	L	L	E	E	G	F	I	V	L	P	Y	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	V	V	L	A	R	K	L	E	E	L	.	G	V	H	A	I	X	P
Template Known Secondary structure				S	S						B			T	T	T			B															T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												.	T		S		B
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																			.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.										.	.	240	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L	K	N	.	.	.	.	.	.	.	.	.	A	F	S	Q	A	L	K	N
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence							.								.	.																										.																							.	.	.	.	.	.	.	.	.
Template Conservation							.								.	.																										.
Template Sequence		G	A	S	P	I	.	G	S	G	Q	G	I	L	.	.	N	P	L	N	L	S	F	I	I	E	Q	A	K	V	P	V	I	V	D	A	G	I	G	S	P	.	K	D	A	A	Y	A	X	E	L	G	A	D	G	V	L	L	N	T	A	V	S	G	A	D	D	P	V	K	X	A	R	A	X	K	L	A	V	E	A
Template Known Secondary structure			S	S	S	T	.	T						S	.	.													S	S		B				S				S		.									T	T		S					S					T	S	S	S
Template Predicted Secondary structure							.								.	.																										.
Template SS confidence
		154	.	.	.	.		.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions