Job Description P0C8J6 Confidence 98.05% Date Thu Jan 5 11:30:05 GMT 2012 Rank 33 Aligned Residues 209 % Identity 14% Template d1xcfa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		6	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
Predicted Secondary structure														.	.											.	.																																														.
Query SS confidence														.	.											.	.																																														.
Query Sequence		T	K	Q	M	L	N	N	A	Q	R	G	G	.	.	Y	A	V	P	A	F	N	I	H	N	.	.	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	.	Y	H	H	P	L	A	I	H
Query Conservation														.	.											.	.																																														.
Alig confidence														.	.											.	.																						.	.	.	.																					.
Template Conservation																																																	.	.	.	.
Template Sequence		Y	E	S	L	F	A	Q	L	K	E	R	K	E	G	A	F	V	P	F	V	T	L	G	D	L	G	I	E	Q	S	L	K	I	I	D	T	L	I	E	A	G	A	D	A	L	E	L	.	.	.	.	G	I	P	F	V	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L
Template Known Secondary structure											T	T	T											S	S	S																T		S	S				.	.	.	.																						S	S	S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		L	.	.	.	.	.	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																						.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Y	A	N	L	V	F	N	K	G	I	D	E	F	Y	A	R	C	E	K	V	G	V	D	S	V	L	.	.	V	A	D	V	P	V	E	E	S	.	.	.	.	A	P	F	R	Q	A	A	L	R	H	N	V	A	P	I	F	I	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	A
Template Known Secondary structure																							T						.	.		T	T			G	G	G		.	.	.	.										T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																													.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	A	Q	A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	S	A	P	A	L	D	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A	T	E	L
Query Conservation
Alig confidence												.														.	.	.	.	.	.	.																									.
Template Conservation												.														.	.	.	.	.	.	.																									.
Template Sequence		D	D	D	L	L	R	Q	I	A	S	.	Y	G	R	G	F	T	Y	L	L	S	R	A	A	.	.	.	.	.	.	.	A	L	P	L	N	H	L	V	A	K	L	K	E	Y	N	A	A	P	P	L	Q	G	F	G	.	I	S	A	P	D	Q	V	K	A	A	I	D	A	G	A	A	G	A	I	S	G	S	A	I
Template Known Secondary structure												.				S										.	.	.	.	.	.	.														T	T									S	.	S												T	T		S
Template Predicted Secondary structure												.														.	.	.	.	.	.	.																									.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		236	.											.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	.	.	.	.	.	.	.	.	.	.	A	F	S	Q	A	L	K	N	Y	L	T	E
Query Conservation				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	I	I	E	Q	H	I	N	E	P	E	K	M	L	A	A	L	K	V	F	V	Q	P
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions