Job Description P0C8J6 Confidence 93.08% Date Thu Jan 5 11:30:05 GMT 2012 Rank 176 Aligned Residues 211 % Identity 17% Template d1vrda1 SCOP info TIM beta/alpha-barrel Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH) Resolution 2.18

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		M	Y	V	V	S	T	K	Q	M	L	N	N	A	Q	R	G	G	Y	A	V	P	A	F	.	N	I	H	N	L	E	T	M	Q	V	V	V	E	T	A	A	N	L	H	A	P	V	I	I	A	G	T	P	G	T	F	T	H	A	G	T	E	N	L	L	A	L	V	S	A	M	A	K	Q	Y	H	H	P	L	A	I
Query Conservation																									.
Alig confidence																			.						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	T	V	T	E	A	A	L	A	K	A	L	A	R	E	G	.	G	I	G	I	I	H	K	N	L	T	P	D	E	Q	A	R	Q	V	S	I	V	K	K	T	R	L	L	V	G	A	A	V	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T		S									T	T	T	.							S	S	S														T											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	D	H	H	T	K	F	D	D	I	A	Q	K	V	R	S	G	V	R	S	V	M	I	D	A	S	H	L	P	F	A	Q	N	I	S	R	V	K	E	V	V	D	F	C	H	R	F	D	V	S	V	E	A	E	L	G	Q	L	G	G	Q	E	D	D	V	Q	V	N	E	A	D	A	L	Y	T	N	P	A	Q
Query Conservation
Alig confidence		.	.	.	.																																																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	P	E	T	M	E	R	V	E	K	L	V	K	A	G	V	D	V	I	V	I	D	T	A	H	G	H	S	R	R	V	I	E	T	L	E	M	I	K	A	D	Y	P	D	L	P	V	V	A	.	G	N	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	E	G
Template Known Secondary structure		.	.	.	.	T	T											T	T		S							S			S	S															T	T	S					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.																																																	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.																				.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																											.	.	.	.	.	.							.
Query SS confidence																											.	.	.	.	.	.							.
Query Sequence		A	R	E	F	A	E	A	T	G	I	D	S	L	A	V	A	I	G	T	A	H	G	M	Y	A	.	.	.	.	.	.	S	A	P	A	L	D	.	F	S	R	L	E	N	I	R	Q	W	V	N	L	P	L	V	L	H	G	A	S	G	L	S	T	K	D	I	Q	Q	T	I	K	L	G	I	C	K	I	N	V	A
Query Conservation																											.	.	.	.	.	.							.
Alig confidence								.																			.	.	.	.	.	.							.																									.
Template Conservation								.																																																								.
Template Sequence		T	E	A	L	I	K	.	A	G	A	D	A	V	K	V	G	V	G	P	G	S	I	C	T	T	R	V	V	A	G	V	G	V	P	Q	L	T	A	V	M	E	C	S	E	V	A	R	K	Y	D	V	P	I	I	A	D	G	G	I	R	Y	S	.	G	D	I	V	K	A	L	A	A	G	A	E	S	V	M	V	G
Template Known Secondary structure								.	T	T		S						S	S		S	T	T																										T	T	T							S				S		.									T	T		S					S
Template Predicted Secondary structure								.																																																								.
Template SS confidence
		280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		233	.	.	.	.	.	.																													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	L	K	N	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	A	L	K	N	Y	L	T	E	H	P	E	A	T	D	P	R	D	Y	L	Q	S	A	K	S	A	M	R	D	V	V	S	K	V	I	A	D	C	G	C	E	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	F	A	G	T	E	E	A	P	G	E	T	I	L	Y	Q	G	R	K	Y	K	A	Y	R	G	M	G	I	E	G	M	V	P	Y	K	G	T	V	K	D	V	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	V	G	G	L	R	S	G	M	G	Y	I	G	A	R	T
Template Known Secondary structure						T	B	T	T	S	S	S						T	T							B					B							B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T		S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.																		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions